Bombus pascuorum (common carder bee): 132913568
Help
Entry
132913568 CDS
T09597
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas04140
Autophagy - animal
bpas04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132913568
04148 Efferocytosis
132913568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpas04131
]
132913568
Membrane trafficking [BR:
bpas04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132913568
Hops complex
132913568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-C3H2C3
WDR55
zf_RING_Vps8_fungal
zf-RING_5
zf-RING-like
zf-C3HC4
TPR_11
Motif
Other DBs
NCBI-GeneID:
132913568
NCBI-ProteinID:
XP_060827982
LinkDB
All DBs
Position
13:9171668..9176629
Genome browser
AA seq
1093 aa
AA seq
DB search
MMAFLEWRRFNFFDLKKEVDGGKIATALGDAQVTAATSGNGTLVFGDYAGNVHLVNRTYD
VTTFRAYDVTLTLAQQVQHSTFLFTVGEDESGCNPTIKVWNLAKPDKQGNPTCLRISRAI
PSYRAVPATALCVHTSLTLMAIGFGDGSIMLYRGDLTRERKNKIKVFEHTNFSVTGLAIK
SSGKQTHLFVATPNSVFVYNITVKDQEFKSPLDTMGCARKCSVLAESMQDSHFMIGRDDA
IYCYTPDGRGPCYAAGGQKIMLEWFRSYLVIIAKEAANDPRTTTTISAKPSTIEPIPPGV
DKHVITVLDIQNKCIVFSAPMLSVQAVLSEWGGFFILSGDSKLYHLDEKDLQSKLALLFK
KNLYDISIRIAKNQQYDAEGLVDIFRQYGDHLYSKGDHTGAIEQYIKTIGKLEPSYVIRK
FLDSQHIDNLTTYLQALHKNGQATEDHTTLLLNCYTKLNHTDKLKEFIMTKDREIDFDVE
IAIKVCRQASPEDALLLAKKHNRYEWYLRIQIEDKHEYKKALEYMATLDFEEAESNMKKY
GTILIENVPDESTQFLKALCTNYRPSNQPLVDQEMLDGTVDQHIDKANPEDFIHLFLNNS
ERLVEFLEHLVKMNTKWSTLVYNTLVEHYLHIWSALDNDVAKVQYEQKIVRLLQNSEACY
DKDQILILCHQHNFRRGLLFLYEESKLYQEILRFHLREGDSEQILAMCKRFGHQDPNLWV
QALWSVARNKEAPTKLLADILTHIGQERLLSPLMVLDALSTSLSCTLGDVRTYFNSVLRT
EHKQTQADIELSEKYQADTKKIREQIDSIKNSTIIFQGSRCSACHHQLELPSVHFMCQHS
YHQHCFQRFSENENECPACLPDNKKLLDIIKAQEQSKDLHETFHSLLDRAEDPFSLVADY
FGRGVFKKLMVITDSDKMLSASVAKFDESKLNYGPGAEARIRLSEGKNTTLGKTETHRSY
DNYNTVADDRLRSYPKSDLYSSSVETNISGTINDISSPRGNSKKAVPVPIKEARILNSTT
PKSSPVQKSYVPPKTPIVPSNPFGADDYDESKNPFAEDKDDDTTNPFKDNDDTNPFKNND
DDDYNKNLNPFGR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatttctcgagtggagacgcttcaatttttttgatcttaaaaaagaagttgac
ggcgggaaaatagccacggcacttggtgacgcccaagtgacagcagctacgagcggtaac
gggactctagtattcggagattatgcaggcaatgtgcatttagtgaatagaacttacgat
gttaccacatttcgtgcttatgatgtcacattaacgctagctcaacaagtccaacattcc
actttcttgtttaccgttggtgaagatgaatcaggttgtaatcctaccataaaggtctgg
aatttagctaaaccagataaacaaggcaatccaacatgtcttcgtataagtagagctata
ccaagttatagagcagttcctgcaactgctctatgtgtgcatactagtcttacattaatg
gctattggctttggagatggctctattatgctatataggggtgatttaactagggaaagg
aaaaacaagataaaagtattcgaacataccaatttttcagttactggtttagcaataaaa
tctagtggcaaacaaactcatttatttgttgctacaccaaatagcgttttcgtatataat
attactgttaaggatcaagaatttaaatctcccttggacactatgggctgtgccagaaag
tgtagcgttcttgcagaatctatgcaagatagtcatttcatgattggtcgtgatgatgca
atttattgttacactccagatggtagaggtccttgttatgcagctggcggtcaaaaaatc
atgttagagtggttcagaagttacctagttattatagcaaaagaagctgcgaatgatcca
agaacaacaactaccatttctgcaaaaccaagtactatagaaccaatacctccaggagtg
gataagcatgtgattacagtacttgatatacaaaacaaatgtattgttttttctgcccca
atgttgtctgtgcaagctgttctatcagaatggggtggattttttatactcagtggagat
agtaaactttatcacttagatgaaaaagacttgcaatcgaaattagcattacttttcaag
aagaatttatatgatatatctataagaatagctaaaaatcaacaatatgatgctgaaggt
ttagtcgatatattccgacaatacggcgatcatttatattcaaaaggggatcatactgga
gcgatagaacaatatattaaaactattggaaagttagaaccgtcatatgtaattagaaaa
tttttagattctcaacacatagataatctaacgacctatttgcaagctttgcataaaaat
gggcaggcaacagaagatcatacaactttgctattgaattgttatacgaaactcaatcat
acagataaattaaaagaatttatcatgacaaaggatagggagattgatttcgatgtcgaa
attgcaataaaagtttgtcgtcaagcatcgccggaggatgctttgctgcttgcaaaaaaa
cataatcgttacgaatggtatcttcgtattcaaatagaagataaacacgagtacaaaaag
gcattagaatatatggctactttggactttgaagaagcagaatccaacatgaagaaatat
ggtactatcctgatagaaaatgtgccagatgaatcaacgcaatttttgaaagccttatgt
accaattataggccttccaatcaaccacttgtagatcaggaaatgttagatggtactgtg
gaccaacacatcgataaagctaatccagaagattttattcacttgtttttaaataattca
gaacgtctcgtagaattcttagagcacctagtaaaaatgaataccaagtggagcactttg
gtatacaatactttagtagaacattatcttcatatttggtcagctttggataatgatgtg
gcaaaagtacaatatgaacagaaaattgtacgacttttacaaaattcggaagcgtgttac
gataaagatcaaatattaatcttatgccatcagcataatttcaggcgtggtttactcttt
ctttatgaagaaagtaaattataccaagagatattacgattccatttacgcgaaggagac
agtgaacaaattttagctatgtgcaaacgatttggacatcaagatccgaatttatgggtc
caagctttatggagtgttgcaagaaataaagaagcaccaactaaacttcttgcagacata
ctaacccacataggtcaagaaaggcttttgtcacctttgatggttcttgatgcactatct
acttcactttcttgtaccttgggcgatgtgagaacctattttaacagtgtgttacgaaca
gagcataaacaaacacaagcagatatagaattatccgaaaagtatcaagctgatactaaa
aagatacgagaacaaatagattcaattaaaaatagtactattatcttccaaggatcacgt
tgcagtgcgtgtcaccatcagttagaacttccatcagtacattttatgtgtcagcattca
tatcatcaacactgctttcaaagattctcagagaatgaaaatgaatgtccagcttgttta
ccagacaataaaaaattgttggatatcataaaagcacaggaacaatcaaaagatcttcat
gaaacatttcacagtttattggaccgagcagaggatccattctcattagttgctgattac
tttggtcgcggagtttttaaaaaattaatggtgatcacagatagcgacaaaatgttgtca
gcgtcggtggcaaagtttgatgaatcaaaattgaattatgggccaggagcggaagccaga
atcagattatcggagggaaagaacacaacgttaggaaaaactgaaactcatcgttcgtat
gataattataatacagtagcggatgatcgactgcgatcttatccaaaatcagatctgtac
tcttcatcagtagaaacgaatatttctggtacaatcaatgacatatctagtccacgagga
aattcgaagaaagctgtgccagtacctataaaggaagcccgtattctaaacagcacgaca
ccaaaatcatctccagttcaaaaatcgtacgtgccaccaaaaacaccgattgtaccatcg
aatccatttggagcagacgactacgatgaatcgaaaaatccatttgccgaagacaaagac
gatgacactactaatccttttaaagataacgacgacacaaatccctttaagaataatgac
gatgatgactataataagaacctgaatccttttggtagataa
DBGET
integrated database retrieval system
