Bombus pascuorum (common carder bee): 132913606
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Entry
132913606 CDS
T09597
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas04140
Autophagy - animal
bpas04142
Lysosome biogenesis
bpas04145
Phagocytosis
bpas04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
132913606
04142 Lysosome biogenesis
132913606
04140 Autophagy - animal
132913606
04148 Efferocytosis
132913606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpas04131
]
132913606
Membrane trafficking [BR:
bpas04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132913606
Hops complex
132913606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-C3H2C3
zf_RING_Vps8
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf_RING_Vps8_fungal
COMP
zf-RING_Vps41
zf-RING_16
Occludin_ELL
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
132913606
NCBI-ProteinID:
XP_060828024
LinkDB
All DBs
Position
13:complement(5029482..5034951)
Genome browser
AA seq
1002 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVYTPPIRPDISTAGFIQMKFLDDGPIFIKQKVNFLPPDKILHL
VVNNNIIVIAMANNLLLRIDMKHPDSPEEIDISKYAMNMEMSRMFLDPLGNHLLISLVPK
SQDPPNSPPELFYLHRKTTKLKQAGKFKGHEITAIGWNFSNSSETTTGPILLGTSKGLIF
ETEIGLDGDKIFNTSLEQYWRQLPNYLPLYGAKEVEGLVFDIGKDSKPPITGLEFHKIPN
TDKYVIIVTTLMRIYQYIGAVQNPEEKPLLQQIFNKYLNVQESFNEVINNLPYSKIQFYY
PSLGILPKSFGWLTEPGIFYAQIDPKIDPKSVLTNQQMLICPEASLMGINTSQTSTPPLS
FVLTEFHALLLYTDRVKGMSLLNQDLIFEDIYNDAVGGLLNITKDYATRSIWAYSEKAVF
KYKVNKEDRNVWQIYVDKGEFELAKQYCKDNPAHIDQVLVKQAEMLFKNKEYEKSALIYA
DTHSSFEVISLKFLQEWQIDALKTFLKKKLEGLKTQDKTQITMIVVWVIELFMNQMGVLR
SNNTSYLHDPQYLELQKQFDSFLAIPKVEECIKRNRSTIYDLMASHGDKDNLIRLTIMHC
NYEEVIRQHLYKNNYLDALEVLKSQNNKELFYQFAGILLQELPRPTMTALISQGSLLKPS
KLLPALVSCNSDEKHAKEVIRYLEFCVYKQSCQEQAIHNFLLSLYARYKRDEVMRYISSQ
GQDINMVHYDVHYALRLCQEVGLTEACVQLSALLGLWTTAVDLALTINVDLAKQIAAMPS
DHDDELRKKLWLKIAEHVVREKDDIQQAMEFLQHCDIVRIEDILPFFSDFVTIDHFKDAI
CNSLQEYNQHIQDLKEEMQEATKAAELIRKDIQEFRTRCTFINTKDTCNTCGVQLLLRPF
YVFPCGHRFHSDCLVAALTPMLSMDQRTKLADLQRQLTALSNKPEDTRSVRSVSLSTKDQ
IKADIDDLIASECLYCGELMIESIDKPFIEEEDYERVMKEWI
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgtttgatcagtatgagcaagcatctcaaagatcaaaacaagtatataca
ccaccaattcgtccagatattagtactgctggatttatccaaatgaaatttctagatgat
ggcccaatttttattaaacagaaagttaattttttaccaccggataaaattttacatctt
gttgttaacaataatatcattgttattgccatggctaataatctcctcttacgtattgac
atgaaacatccagattcacctgaagagattgatatatctaaatatgcaatgaatatggaa
atgtcaagaatgtttcttgatcctttaggtaatcacttgttgatatctctagttccaaaa
tctcaagatcctcctaattctccccctgaattattttatttacacagaaaaacaacaaaa
ttaaaacaggcaggtaaattcaagggacatgagatcactgccattggatggaacttttca
aattcttccgaaactactacaggtccaattctcttaggaacttcaaaaggtctcattttt
gaaacagaaattggtttagatggtgataaaatatttaatacaagcctggaacaatactgg
cgtcagcttcctaactatttacctctttatggtgctaaagaggtagaaggattggtattt
gatatagggaaggatagtaaaccaccaattactggtttagagtttcataaaataccaaat
actgacaaatatgtgattattgttactactcttatgcgaatttatcaatatattggagca
gtacaaaatccagaagaaaaacctttattacaacaaatttttaacaaatatttgaatgta
caagagagcttcaatgaagtaataaataatttgccttattctaaaattcaattttattat
ccttcacttggtattttaccaaaatcgtttggttggttaactgaacctggtatattttat
gctcagattgatccaaaaatagatccaaaaagtgtgttaacaaatcaacaaatgttaatt
tgtcctgaggcaagtctaatggggatcaatacgtcacaaacaagtactccacccttatct
tttgttttaacagaatttcatgccttattactttatacagaccgtgtaaaaggcatgtcg
cttttaaatcaggatttgatattcgaagacatttataatgatgcagtgggaggattactt
aatattactaaagattatgcaacacgttccatatgggcttatagcgaaaaagcagtattt
aaatataaagttaataaagaagatagaaatgtttggcagatctacgttgataaaggtgaa
tttgaacttgcaaaacaatattgtaaagataatccagcacatatagatcaagtgctcgta
aagcaagcagaaatgctttttaagaataaggaatatgaaaaaagtgctcttatatatgca
gatactcattcgtcatttgaagtaatttccttaaaatttctacaggaatggcaaatagat
gctttaaagacatttcttaaaaagaaacttgaagggttaaaaacacaagataaaacgcaa
ataaccatgattgttgtatgggtaattgaactatttatgaatcaaatgggtgtattacgg
agtaacaatacatcatatttacatgatccacaatatctagaattacaaaaacaatttgat
agctttcttgcaataccaaaagttgaggaatgtattaaaagaaatcgtagcactatatat
gatttaatggcaagtcatggtgataaagacaatcttattcgtttaactataatgcattgc
aactatgaagaagtgatacgtcagcatttatataaaaataattatttagatgctcttgaa
gttttgaaaagccaaaataataaagagttattttatcagtttgctgggattcttttacaa
gaattaccacgccctacaatgactgctctaatatcacaaggatctttattaaagccatct
aagcttctaccagctttagtatcttgtaatagtgatgaaaaacatgcaaaagaagtaata
agatacttagagttttgcgtttataaacaaagttgtcaagaacaggcaattcataatttt
ctattatctttatatgctcgttataaacgagacgaagtaatgcgttatattagctctcaa
ggtcaagatataaatatggtacattatgatgtgcattatgcattacgattgtgccaagag
gttggtttaacagaagcttgtgtacagctgtctgctttacttgggttgtggacaacagca
gttgatttagctttaacaattaatgttgatcttgctaaacaaatagctgctatgccctct
gatcatgatgatgaattaaggaaaaagttatggttgaaaattgctgaacatgtagttcga
gaaaaagatgacatacaacaagcaatggaatttttgcagcattgcgatatagtcagaata
gaagatatattacctttcttttcagattttgttactatagatcatttcaaggatgctatt
tgcaattcattgcaggaatataatcaacatattcaagatttaaaggaagaaatgcaagaa
gcaacaaaagcagcagaacttattaggaaagatatacaagagtttagaacgaggtgcaca
tttataaatactaaagatacatgtaatacttgtggtgttcaattactactacgacctttt
tacgtatttccatgtggacacagatttcatagtgattgccttgtagctgcattaacacct
atgttgtcaatggatcagagaacgaagctagctgatcttcaaagacaactcactgctctt
tcaaataaacctgaagatactagatcagtcagatctgtatctttatctacaaaagaccaa
atcaaggctgacattgatgacttaatagcatctgaatgtttatattgtggagaactaatg
atagagtctatagataaaccatttattgaagaagaggactatgagagagtgatgaaagaa
tggatatga
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