Bombus pascuorum (common carder bee): 132913756
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Entry
132913756 CDS
T09597
Name
(RefSeq) uncharacterized protein LOC132913756 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132913756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpas03041
]
132913756
03009 Ribosome biogenesis [BR:
bpas03009
]
132913756
Enzymes [BR:
bpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132913756
Spliceosome [BR:
bpas03041
]
Complex A
U1 snRNP components
U1 related factors
132913756
Complex B
132913756
Ribosome biogenesis [BR:
bpas03009
]
Eukaryotic type
Pre-60S particles
Helicases
132913756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
132913756
NCBI-ProteinID:
XP_060828271
EnsemblRapid:
ENSBPAG00000016690
LinkDB
All DBs
Position
13:1530360..1534966
Genome browser
AA seq
605 aa
AA seq
DB search
MFNRDRDHNRARRGGSGRGNNKGGSDSIRGNSINICGIRGRGTTNNIRGIVKNKQPGGTL
RKINWDVRSLEPLRKDFYIEHPTVRSRSKEEVCQFRENAEITIKGDNIPNPIQYFEEGNF
PPYVLDEIHKQGYSQPTAIQAQGWPIALSGRDLVAIAQTGSGKTLGYVLPAIVHIIHQPR
LGNGDGPIALILAPTRELAQQIQEVANCFGEAAGVRNTCIFGGAPKGPQAHDLERGVEIC
IATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT
WPKEVRALAEDFLTDYTHLNIGSLTLSANHNIIQIVDVCQEFEKDLKLYRLLQEIGNEKE
NKTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDVA
ARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKHAGDLIEVLR
EAGQNINPRLTEMAELAKSGSYGSRSGKRFMSNDRSNARRGNTDTRGRGGSTRGRGRGGN
SYQSTSNNYSNSDYNSYNNMRQSNSTNPNTGYGYTQRTYGQSNLAPSYGGGDNYGSTYQY
RGTTY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcgagacagagatcacaatagagcccgcagaggtggtagtggcagaggtaat
aataaaggaggtagtgatagtattcgtggtaatagcattaatatatgcggtatacgtggt
agaggcactactaataatatcagaggtattgtaaaaaacaaacaacctggaggaactctt
agaaaaatcaattgggatgtgagatctttagaacctttgcgtaaagatttttatattgaa
catcctacagtaagaagcaggtcaaaagaagaagtatgccagttcagagaaaatgcagaa
ataactataaaaggtgacaatatacctaatcctattcaatattttgaggaaggtaacttt
ccaccttatgtattggatgaaatacataaacagggatactctcagcctacagcaattcaa
gcacaaggatggcctattgcacttagtggcagagatttagttgctattgcacaaactggc
tctggaaaaacgctaggatatgttttaccagcaattgtacatatcatacatcaaccacgt
cttggtaatggagatggtccaattgctttaatcttagctcctacaagagaattagcccaa
caaattcaggaagtagctaattgttttggagaagcagcaggtgtaagaaatacctgtatc
tttggtggtgcacctaaaggaccacaagcacatgatttagaaagaggtgttgaaatatgt
attgctacaccaggtagacttattgatttcctggaaagagggactacaaatttacgcaga
tgcacatatttagtattagatgaagctgatagaatgttggatatgggttttgaacctcaa
ataagaaagataattgaacaaattcgacctgatagacaggttttgatgtggtcagctaca
tggcctaaagaagttcgtgcattagctgaggactttctgactgactatacacatcttaat
attggttctctgactttatcagctaatcataatattattcaaattgtggatgtttgccag
gagtttgaaaaagatttaaaattatatagactacttcaagaaattggaaatgaaaaagaa
aataaaacaataatttttgttgaaacaaaacgaaaagtggatgatattacaagaaatatc
aggcgagatggatggcaagcattgagtattcatggcgataaaaatcagcaagaaagagat
catgtattacaggaatttaaaagtggaagagctcctattttagttgcaacagacgtagct
gctagaggcttagatgtggatgatgttaaatatgtaataaactttgattatccatcatcg
tcagaagattacatacatagaattggtcgtactggacgaaggagacaaactggtaccgct
tatgcattctttacaactcataacatgaaacatgcaggagatttaatagaggtattaaga
gaagcaggacaaaatataaatccacgacttactgaaatggcagaattagctaaatcagga
agttatggaagcagaagtggcaaacgatttatgagcaatgacagaagtaatgctagacga
ggtaatactgataccagaggaagaggtggttctacgagaggaagaggtcgtggtggaaat
tcttatcaatctacttcaaacaattattcaaattcggactacaatagctataataatatg
agacaaagtaattcaactaatccgaatacagggtatgggtatacacagagaacttatggg
caaagcaatttagcaccaagttatgggggaggagataattatggaagtacttatcaatat
agaggaacaacatactaa
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