Bombus pascuorum (common carder bee): 132913947
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Entry
132913947 CDS
T09597
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpas03009
]
132913947
Enzymes [BR:
bpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132913947
Ribosome biogenesis [BR:
bpas03009
]
Eukaryotic type
Pre-60S particles
Helicases
132913947
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DUF5617
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
132913947
NCBI-ProteinID:
XP_060828628
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All DBs
Position
1:5840570..5844298
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AA seq
772 aa
AA seq
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MKDTNIVGFADPEEINHSDEDNEINNIKKKVCKKSGGFQSMALSFPLLKGILRRGYKIPT
PIQRKTIPLALEGRDVVAMARTGSGKTACFLIPLFEKLKTRRAKAGARALILSPTRELAL
QTLKFIKELGKFTDLKAAVILGGDSMENQFSAIHGNPDILVATPGRFLHICIEMDLQLNN
IEYVVFDEADRLFEMGFGDQITEITNRLPESRQTLLFSATLPKLLVDFAKAGLTDPVLLR
LDVESKIPEQLALSFIVCRLEEKLAVLLCLLKNVIKSDSQTVIFAATQHHVEYIHQILEK
AGISNTYIYSNLDPSARKINAAKFHTSKVRVLIVTDVAARGLDIPQLDNVINFNFPAKSK
LFVHRVGRCARAGRAGTAYNIISPDEYAYLLDLHLFLGRPLSIVPSFGSIENTDGIVGKM
PQAMIEEELAELINWHRCSTDLTSMEKVCDNAYKQYIRSRPAPSSESIKRVKELHISEAG
VIPEYSDVSLSTTNLLSKIVNYRPQGTIFEIGAKASSIDYQVMKKKRTLHKENIINFHRK
ADEVEAKKSAGDLPKKVYLPPSTTDEINEAFNTVVLPKKRNLDDLYKPKKKKRSVIRDEN
FFIPYNAPDKHTEEGLAVNSFNTEADKVQIDLTADNEESQRFQAQIKKWDRKKKKMITVN
NERKVNKIRTESGVWIPASYKSNRYTSWKEKSKVDATNDDDSEEEPSQMQKLQTTANTHW
ARHNQKLKEKIKRNIELKRPEQILKARKLLEQRRKRNGRKNRKGQKNGRRKH
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatacaaatattgtgggatttgccgacccagaagaaataaaccatagtgatgaa
gataacgaaattaataacattaagaagaaagtatgtaaaaaatcaggaggatttcaatcc
atggctcttagttttcctttattgaaggggatattaaggcgtggatacaaaataccaaca
cctattcaaaggaagacaattcctttagctttagaaggacgcgatgtagtggcaatggcc
agaacagggagtggaaaaactgcttgttttttaattccactgtttgaaaaacttaaaaca
aggcgagcaaaagctggagctagagccttaattttatcacctactagagaattggcattg
cagacattaaagttcataaaggaattaggtaaatttacagacttaaaagcagctgtaatt
ttgggaggtgacagtatggagaatcaatttagtgcaattcatggaaatcctgatatatta
gtagcgacgccaggaagatttctacatatctgtatagaaatggacttgcaattaaataat
atagaatatgtagtcttcgatgaagctgataggttatttgaaatgggttttggagatcaa
attactgaaatcacaaatagattaccagaatcgagacaaacattattattttctgcaaca
ttacctaaacttttagtagattttgcaaaagctggattaactgatcctgtcttattacgt
ttagatgtagaaagtaaaataccagaacaattagcactctcatttatagtatgtcgccta
gaagaaaaattggctgtactattatgcttgttaaaaaatgttattaagagtgattctcaa
acagtaatatttgctgcaactcaacatcatgttgaatatattcatcagatattagaaaaa
gctggaatttctaacacgtatatctattctaatttggatccatcagcacgaaaaataaat
gcagctaaatttcacactagtaaagtcagagttctaatagtaacagatgttgccgctcga
ggtttagatattccacaattggataacgtaatcaattttaatttccctgcaaagtcgaag
ctctttgtacatcgagtaggtcgttgtgcacgagcgggacgtgctggcactgcatacaat
attataagtccggacgaatatgcttatttactagatttacacctttttcttggacgcccg
ttaagtattgtaccatcttttggatctatagaaaatacagatggtattgtgggtaaaatg
ccacaagcaatgatagaagaagaacttgcagaattaataaattggcaccgttgttccaca
gatctaacaagtatggaaaaagtttgcgataatgcatataaacaatatattcgatcgcga
cctgcaccttcatcagaaagtattaagagagtaaaggaattacatattagcgaagcaggt
gttataccagaatattctgatgtttctttaagtaccacgaacttattatcaaaaatagtc
aattatagacctcaaggaacgatattcgaaattggagctaaggcatcatctattgattat
caagttatgaaaaaaaaacgtacgttacataaagaaaatattataaatttccacagaaaa
gcagatgaggtagaagctaaaaaaagtgcaggagatttaccgaaaaaagtgtatcttcca
ccgagtacaaccgatgaaattaatgaagcatttaatacggttgtacttccaaagaaaagg
aatctcgatgatttatataaacctaaaaagaaaaaacgatcggtaatacgagacgaaaat
ttttttattccatataatgctccagataaacatacagaggaaggtttagcagttaattca
tttaatacagaagcagataaagtacaaatagatttaactgctgataatgaagaatctcaa
cgatttcaagcacagattaaaaaatgggatcgtaaaaagaaaaaaatgattactgttaat
aatgaacgaaaagttaataaaatacgaacagagtctggtgtttggatacctgccagttac
aaatcaaatcgttatacgagttggaaagaaaaaagcaaagtcgatgctacaaatgacgat
gacagcgaagaagaaccttcacaaatgcagaagttgcaaacaacggctaatacacattgg
gcgcggcacaatcaaaagttaaaggaaaagatcaaaaggaatatcgaattgaaacgtcca
gaacaaattctaaaggcccgtaaattgcttgaacaaagacgtaaaagaaacggccgaaaa
aatcgaaaaggtcagaagaatggtagaaggaaacattag
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