Bombus pascuorum (common carder bee): 132914056
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Entry
132914056 CDS
T09597
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132914056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132914056
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132914056
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
132914056
RNA polymerase I system
132914056
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
132914056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW7_SPT5
KOW2_Spt5
KOW
KOW6_SPT5
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
SH3_KIN17_C
Motif
Other DBs
NCBI-GeneID:
132914056
NCBI-ProteinID:
XP_060828834
LinkDB
All DBs
Position
14:complement(7975763..7981560)
Genome browser
AA seq
1132 aa
AA seq
DB search
MSDSEASNLSDNESDREVGGSESDQEENRSVKSAAGSDGGNAGERSRSVSRSRSPSRSRS
RSPSRWRSRSRSASGSEDGRGDEAEEARSGDEEVEPEEEPEGEDLDGSSEYDEEEEEEDD
DRPRKKRRKDKYRDFIIDEAEVDDEVEDDEEWEEGAQEIGIVGNEVDELGPTAREIEGRR
RGTNLWDSQKEDEIEEYLRKKYADESIATRHFGDGGEEMSDEITQQTLLPGVKDPNLWMV
KCRIGEEKATVLLLMRKFITYQYSNEPLQIKSIVAPEGVKGYIYIEAYKQPHVKAAIENV
GNLRMGIWKQQMVPIKEMTDVLRVVKEQTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQ
VHLKLLPRIDYTRPRGALRTAQSESEALKRKRKRRPTAKPFDPEAIRAIGGEVTSDGDFL
IFEGNRYSRKGFLYKNFTTSAIIAEGVKPTLSELERFEEAPEGVELDLSGTQGTGAGNKE
DATVTHSFSTGDNVEVCEGELINLQGKIVSIDGNMIMVMPKHEELREALEFQASELRKYF
TMGDHVKVVAGRYEGDTGLIVRVEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLG
QFQWGDLVQLDAQTVGVIVRLERENFHVLSMHGKVIEARPQGLTKRRENRNAVALDSQQN
TIQRKDIVKVVDGPHAGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKSN
ISAVSPVTGFMSPRIASPMHPSGGGFGRGGGGGRGRGRGGGARRDRELIGTTIKITGGPY
KGNVGIVKDATETTARVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYGGGQTP
MYARDGSKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTND
FDGYSMEEGGSPGYAPGYPSTGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPTG
YVATPSPSGTGYTTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTSVGSGIIGG
AEWHTTDIEVRIRDSHQDPALAGQQGVIRGISGGMCSIFLPVEDRVVNLICEDVEPVVPS
RGDRVKVIIGEDREAVGTLLSIDNQEGVVKLNKDEVKMLHLRFLCKMKASNT
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcagaggcgagcaatctatcagacaatgaaagcgatcgagaagttggtggc
agcgaaagtgatcaagaagagaaccgttcagtgaaatccgcagctggcagcgatggtgga
aacgctggtgaaagatcacgtagcgtctctcgcagtagaagtccgtccaggtcgcgatcg
aggagtccatccaggtggcgatcacggtctcgatcagccagcggttcggaggatggtaga
ggagatgaagcagaggaagcaagatctggtgatgaagaggtggagcctgaggaagaacct
gaaggggaagatttggatggaagtagcgaatatgatgaggaagaagaagaggaggatgat
gatagacctcgtaagaaaaggagaaaagataaatatcgcgattttatcatagacgaagct
gaagtagatgatgaagttgaagatgatgaggaatgggaagaaggtgcccaagaaattggt
attgttggaaatgaagtggacgagttgggtcctactgccagagaaattgaaggcagacgt
agaggaactaatctttgggattctcagaaggaagatgaaatagaagagtatcttagaaaa
aagtatgcagatgaatctattgctactcggcattttggtgatggcggtgaagaaatgagc
gatgaaattacacaacaaactttactgccaggtgtaaaagatccaaatctgtggatggta
aaatgccgtattggagaagaaaaagcaacagtactgttgttaatgcgaaaatttataaca
taccaatattcaaatgaacctcttcaaataaaatctattgttgcacctgaaggagtaaag
ggttatatttacatagaagcatacaaacaaccacacgtaaaggcagctatcgaaaacgta
ggaaatctaagaatgggtatttggaaacaacagatggtaccgatcaaagaaatgaccgat
gtgttacgtgtagttaaagaacagacaggcttaaaagcgaaacaatgggttagactaaaa
agaggcatttataaagatgacatagctcaagttgactacgttgacttggcacagaatcag
gttcatttgaaattgttgcccagaattgattatactagaccacgtggagctttgagaaca
gcacaaagcgaatctgaagctttaaaacgcaagagaaaaagaagaccaacagccaaaccg
tttgaccccgaagcaattcgtgctatcggaggagaagtcactagcgatggtgacttcttg
attttcgaaggaaatagatatagtagaaaaggatttttgtataaaaattttacgacaagt
gcgattatcgcagaaggtgtgaaaccaacattatctgaactagaaagattcgaggaggct
cccgagggcgttgaattagatttaagcgggactcaaggaactggtgcgggtaataaagaa
gatgcgacggtgacccattccttcagcacaggggacaatgtcgaagtatgcgagggagaa
ttgattaacttgcaaggaaaaattgtctctatagatggaaacatgattatggttatgcca
aaacatgaggagcttagagaagctttagaatttcaagcgtctgaattacgaaaatatttc
actatgggcgaccacgttaaggttgttgcaggaagatatgagggcgatactggtttaata
gttcgagtcgaacaaaatagagtagttttgttttctgatctttcaatgcatgaattagaa
gtgcttccgagagatctacaactttgttcggatatggcaactggagtagacagtttaggt
caattccagtggggtgatttagtacagttggacgcacaaaccgtgggtgtaattgttcga
ttggagcgtgaaaattttcatgtactttcaatgcatggcaaggttatagaagctagacct
cagggactcacaaagagacgcgagaatagaaatgcggtggcattagactcacaacagaac
actatacaaaggaaagacattgtcaaagtggtagatggtccacacgctggaaggggtgga
gaaataaaacatttgtacagaagctttgcatttttgcattcgcgaatgttcgttgacaac
ggtggaattttcgtttgcaaaacgagacatttgcaactttctggtggaaataagtccaac
atatcggctgtgtcacctgtgacaggattcatgtcgccaagaatagcatcgccaatgcat
cctagtggaggtggcttcggaagaggtggcggaggtggaagaggcagaggtcgtggtggt
ggagccagacgcgatagagaattgataggaactactatcaaaataactggcggaccgtat
aagggaaatgttggaatagtaaaagatgctacagagacaactgctcgtgtagaattacac
tccacctgtcagaccatctccgtggacaggtctcacattgcgaacgttgctgtactcaca
aaggatggtggtttcagcagctacaacaggacaccagcatatggtggtggacagacaccc
atgtatgctagagatggatcgaaaacacccatgcatggctctcaaacaccaatgtacgaa
aatggttctcgtacacctcattatggctcgatgacgccatcccacgatggttcacgcaca
ccaggacaatctggtgcctgggatccagctgttaccaatactcctgccaggacgaacgac
ttcgatggatacagtatggaagaaggcggatctccaggttatgcgccaggttatccttca
actggaccattcacgccacaaacgcctggcacgatgtacggttcagagcagagcttcagt
tcgtatcaaccgagtcctagcccggcaggaagtgccactgcaagtcctagtcctacagga
tatgttgcaactccctcgccaagtggtactggatatactactagcccgcatggagctttt
gccacgccttcacccatgggttacagtcctatgactccaggagttgcaggtagcccatac
aatccacagacaccaggcgccggtctagatacaagcgtcggttccggaatcattggagga
gccgaatggcacacaacagatattgaagttcgaattcgtgactctcatcaagatcctgcg
ttagctggccagcaaggtgttattcggggaatatccggtggcatgtgttcaatcttccta
cctgtagaagacagagtagtgaatttgatttgcgaggacgtagaaccggtagttccatca
cgaggtgaccgagtcaaagtgattatcggagaagacagagaagcagtaggtactctgcta
tccatagataaccaagaaggtgtagtgaaattgaacaaggatgaagtgaaaatgttacac
ttgcgttttttgtgcaagatgaaggcatcgaatacataa
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integrated database retrieval system
