Bombus pascuorum (common carder bee): 132914297
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Entry
132914297 CDS
T09597
Name
(RefSeq) uncharacterized protein LOC132914297
KO
K15542
polyadenylation factor subunit 2
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132914297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132914297
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132914297
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_EIPR1
CFAP251_N
WD40_MABP1-WDR62_1st
WD40_RFWD3
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_WDR41
Beta-prop_WDR11_2nd
PAC11
WD_LRWD1
Beta-prop_SPT8
Beta-prop_ACSF4
WDR54
Motif
Other DBs
NCBI-GeneID:
132914297
NCBI-ProteinID:
XP_060829271
LinkDB
All DBs
Position
14
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AA seq
1056 aa
AA seq
DB search
MSANTQFANPPPAISLPNMSVPPPATPNLSAPPPNLTTINTSGSYQHRYANHRDGARGFF
KPFRPYHAPKIVAAGQDTLQDEFDGKRLRKSVMRKTVDYNSAIIKSLENRVWQRDYRDRR
ALQPDVMYYPDLLPPPSYVDNPINAVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASS
GEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMFQA
HKEAIRGLSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKSLVI
SGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDVKWNENGNWLVTASRDHLLKLFDLRNL
SQEVQTFRGHKKEASSVAWHPSHEGLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIVWT
LAWHPLGHILCSGSNDHTSKFWTRNRPGDLMRDKYNLNTLPAGSAGVDDHEIADEAAVIP
GMGPEDRINADGEPEDKSGGIPGLDLDHAVDEGKKFANKKVPYSKPIPRNFQAQWNEMEA
EDMEQVEALNAFVNQLIETTPGAVPLNEVTPNGIILYGKMIPVEPGSKLAEAISKGNDAI
NKLVFSGEIEELRDVVGPPDNMDDSEEYLQDDSEIDYSKVPDIELPPPLPSSKFAQNPEL
LKALNRGGKRKFDQLIGWSDGGASDRTSKIHQPVFGGVMTEDSQSSDTDLRYTGTKSNQH
SNETNSFHSGQDEDLRKLPHGENARNASRDEDLRFNISSGPGRPSSRSDYDVRSNYADKE
FRSSHGFPLKKSLDNDIYDDRDRDGNSRWDDEKSMNDGPRKGDGGFSGNFDKRDNMPLAI
GSGISNSIPHLGNSISHMSSHHNMQNINPNMTPPIQSLVPHPNMSQHPMQNKPLHPGMQG
IDGPMHMMHHPNMHPGFGPNGPPPGNFGPNFRPPNGNFGPNQHFRPSPLPPFGPNQGPFG
NNFQGLPNFRGPNSGPPNFDRPGFGPGFRGQNPGQNPPNNFNSNFGNFGNKLGPNRGMNR
GPNDNNMGRMGRSGYNNRGRGRDGDQPRGIRGRDNY
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaatactcaatttgcaaatcctccaccagctataagtttacctaatatgtct
gttccacctcctgccactccaaatttatcagctccacctcctaatttgactacaataaac
acatctggaagttatcagcacagatacgctaatcatagagatggagcaaggggtttcttt
aaaccattcagaccttatcatgcacccaaaattgttgcggctggtcaagatacgttacaa
gatgaatttgatggcaaaagacttaggaaatctgttatgcgtaaaactgtggattataat
tctgccattataaaaagcttagagaatcgagtgtggcagagggattacagagacagacgt
gccctacagccagatgtgatgtattaccctgatctgcttccaccacctagttatgttgac
aatcctataaatgcagtcaccacaagatttgtgaagactgcaacaaataaaatgcgttgc
cctattttttgtatggcttggacaccagagggaaggcgccttgttactggtgcatctagt
ggagaatttaccttgtggaatggtcttacctttaattttgaaactatcttgcaggcacat
gatagtccagtgagaacaatggtatggtcgcacaatgagagctggatggtcacaggagat
catgcaggctatgtgaagtattggcagagcaatatgaacaacgtcaagatgtttcaggcg
cacaaagaagcgattagaggactcagtttcagtccaacggatcacaaattggcaacatgc
agtgatgatggaacagtcagaatttgggactttcttcggtgtcatgaagaacgaattctc
aggggtcatggtgccgatgtgaaatgcgtgcactggcatccacaaaaaagtctagtcatc
tctggaagcaaagataatcagcaaccggttaaattatgggatccaaagactggccagtca
ctcgcaacattacatgcacacaagtcgacagtaatggatgttaaatggaatgaaaatgga
aattggctggtaaccgcgtcgcgggaccatttgctcaaattgtttgatcttcgaaattta
agtcaagaagttcaaacatttcgtggtcacaaaaaagaagcttctagtgtcgcgtggcac
ccaagtcacgagggtctattttgtagcggtggcagcgatggagctattttattctggcac
gttggagccgacaaagaagtaggtgcgatagaacaagctcatgacagtatagtttggacg
ttagcttggcatccgctgggacacatcctgtgttccggtagtaatgatcacacttcaaag
ttttggacacgaaacaggcctggtgatttaatgagagacaagtataatctcaacacttta
cctgcaggatcggctggcgttgatgatcatgaaattgctgatgaagcagctgtaatacct
ggcatggggccagaagatagaatcaatgccgatggcgaaccagaagacaaaagcggtggt
attcctggcttggatttggatcatgcagtcgacgaagggaagaaattcgctaacaagaaa
gttccatatagcaagccaattccaaggaatttccaagctcaatggaatgagatggaggct
gaggatatggagcaggtagaagctctaaacgcatttgtgaatcagttgatcgaaaccaca
ccaggagcggtaccattgaatgaagtgacacctaatggtattatattgtacggaaaaatg
attcctgtcgaacccggttctaagttagcagaagcaattagcaaaggaaatgatgccata
aataaactagtattttccggagaaatagaagagctacgagacgttgtgggtccaccagat
aacatggacgattccgaagaatatttgcaagatgacagcgaaatagattattccaaagtt
cccgatatcgaacttccaccgcctttacccagttccaaatttgcacagaatcctgaattg
ctgaaagcgctgaaccgcggtggaaagcggaaattcgatcaactaatcggttggagcgac
ggtggagccagcgacagaacatcgaagattcatcaaccggtgtttggcggagtgatgacg
gaagactcacaatccagtgataccgacttaaggtacacgggaacgaaatcgaatcagcac
tccaacgagactaactctttccacagtggacaggacgaggatctcaggaaacttcctcat
ggtgaaaatgctcgaaatgcgagtcgcgatgaagacttacggtttaacatctccagcgga
cctggaaggcccagttcacgttccgattacgatgtaaggagtaattacgcggataaggag
tttagaagttcgcatggattccccttgaagaagtctttggataacgacatttacgacgac
agagatcgggacggtaattcgcggtgggacgatgagaagtcgatgaatgatggtcccaga
aaaggggatggtggtttttcagggaactttgataaacgtgataacatgccgctagctata
ggctccggcataagtaacagcatacctcatttaggcaacagtatatctcacatgtcgagt
caccataacatgcaaaatattaatcccaatatgacccccccgatccaaagtttagtacca
catccaaatatgtctcagcatcctatgcagaataaaccgctgcatcctggtatgcaagga
attgacggtccaatgcacatgatgcaccatcctaacatgcatcctggttttggtcctaac
ggaccaccacccggaaactttggccctaactttagaccgccaaatggtaattttgggccc
aatcaacactttaggccaagtccattgcctccattcggaccaaaccaaggaccgttcggt
aacaactttcaaggtttgccgaatttccgagggccgaactcaggcccgcccaattttgac
cggccgggttttggtcccggtttccgcggtcaaaaccccgggcagaacccgccaaataat
tttaattcgaattttggtaattttggaaataaactgggacctaatcgtggcatgaaccga
ggtcccaatgacaataacatgggaagaatgggaaggagcggttataataatcgtggtaga
ggacgtgacggcgatcaaccacgagggattcgaggaagagataattattga
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integrated database retrieval system
