Bombus pascuorum (common carder bee): 132914311
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Entry
132914311 CDS
T09597
Name
(RefSeq) zinc finger protein DPF3 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132914311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpas03041
]
132914311
03036 Chromosome and associated proteins [BR:
bpas03036
]
132914311
Spliceosome [BR:
bpas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132914311
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132914311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
PHD_2
Lar_restr_allev
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
132914311
NCBI-ProteinID:
XP_060829297
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All DBs
Position
14:645013..659445
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AA seq
526 aa
AA seq
DB search
MTAITISPAAQGIIQVVNESNLCKIEGFLNDTAYREAIENSSNYNSRLCRERRLRMPFLD
SQTGVAQNHSALFMSSRERLPGLLHGQIYTYPSKRWRKKRRQYLMHYLHPKRGPRGDTED
GNEGVETVTHVNDDSKDSVALKDEHSKDAWYYDEQDMLDMDTYEEPDAESDYDYEESYSS
KRKRRKPRGGGHHPARNHPSSTDSPGGKRTKGGGRGRKKSNYDAVDTDKPFVCDLCSARY
KTRPGLVYHYGHSHSTSSGDPAKELSPSPAEVEPRSVADTAASNQPGGTRRGRQNATSSS
TSSPSPAAPSASAAGASAQPQPQSQPAQPQPQQSQQQPQQPSQQQQPPQQQQQLPAVPPT
AAPASPTIPAVKEEHLPAVPSPGTAVPSPSSVRTEGPPTPGTNEKKAGKSAQPSPYCDFC
LGDARENKKTGGSEELVSCSDCGRSGHPTCLQFTANMIVSVRKYRWQCIECKCCSICGTS
DNDDQLLFCDDCDRGYHMYCLSPPLASPPEGSWSCRLCIAEFHRRD
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacagccattacaatctcgccggctgcacaaggaattattcaagttgtaaatgaaagc
aatttgtgtaaaatcgaaggcttcctcaatgacacagcatatagggaagccattgaaaat
tcctcaaattataatagccgactatgcagagaacgacgtttacgtatgcccttcctcgat
tctcaaacaggtgtagcacagaatcactctgcgctgtttatgtcttcaagagaaagacta
cctggtttgttacatggtcagatatatacatatcctagtaaacgatggaggaaaaaacgg
cgacaatatttgatgcattatttacatccaaaaagaggaccaagaggtgacactgaagat
ggtaatgaaggtgtagaaactgtaacacatgtaaatgatgatagcaaagattcagtggcc
cttaaagatgaacatagtaaagatgcatggtactatgacgagcaagacatgttggatatg
gacacatatgaagaacctgatgctgaaagtgattacgattatgaggaaagttatagtagt
aaaaggaaacgaagaaaaccacgtggaggtggccatcatcctgcacgaaatcacccatct
tctacagatagtcctgggggcaaacgtactaagggtgggggacgcgggcgcaaaaaatcc
aactatgatgccgttgacactgataagccattcgtttgtgacctatgcagcgcacggtat
aaaaccagacctggtctggtctaccattacggtcattcccactctacttcctccggtgat
cctgctaaggaactaagtcccagtcctgccgaagttgaacctaggagcgttgcagacacc
gctgcttcgaaccagccaggtggtacacgtcggggtcgtcagaatgcaacttcgtcgagt
acttcgagtccctctcccgcagcgccgtccgcgtccgctgcgggagcatcggcgcagcca
caaccgcagtctcagccggcccagcctcagccgcaacagtcgcagcaacaaccacagcaa
ccgtctcagcaacagcagccacctcagcagcagcaacaattgcccgcggtaccgccaacg
gcagcgccagcatcgcctacgataccagccgtgaaggaagaacatctgccggcggtgccg
tcgccaggtacagctgtcccctcgccatcctcggtgaggacggaaggcccgccgacccca
gggacgaacgaaaaaaaagctggcaagtccgcgcaaccgtccccatactgcgacttctgt
ctgggcgatgctagggaaaataaaaagaccggcggctccgaagagttggtctcttgcagt
gattgcggtcgctcagggcatccgacttgtttgcaattcacagcgaacatgatcgtttct
gttcgcaagtacaggtggcagtgtatcgaatgcaaatgctgttccatttgtggtacttct
gacaacgatgatcaactgctgttctgtgacgactgtgatcgtggataccatatgtattgt
ctgtctccacctcttgcgtctcctcccgagggctcctggtcttgccgtctgtgcatagca
gagtttcatcgccgtgattaa
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