Bombus pascuorum (common carder bee): 132915081
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Entry
132915081 CDS
T09597
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bpas03036
]
132915081
Enzymes [BR:
bpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
132915081
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Gene silencing
piRNA pathway
132915081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF3884
Motif
Other DBs
NCBI-GeneID:
132915081
NCBI-ProteinID:
XP_060830707
LinkDB
All DBs
Position
16:complement(309707..318296)
Genome browser
AA seq
1000 aa
AA seq
DB search
MSNQNYCDTDAMLPSTATVIKITNILTPYIVRIYEVKDYNEKLNSINKKLLKDEKMFHSV
EKDIEPKIGDTVIVYNRLDITTDCPGWLCRGYISSIENLKDTYNIFLPDYGISIESQRED
FIICSTGAILEEYLTFTVGLYNILPADVKHNLSVQNETLIILEEWSTSAIEYTKELISAS
DIVYFDHIVSDQYGKYYGEFYLNIKNKIICLSEALVLHQYAIYLNKKLLQFIESSMNSEK
LNKEIINDETVFYLNVSQVLDRTSERKKQKESFLKRAKFKKGNYLHHELQRDEEKVLIYG
MDKYEWLSSTLDAKFPAEIHKAWKSLIQSCKPRKIQSYIWPAIKKGLDTVAIGTAKCGKT
IGYIFAICGLLATNSNLPRGVNPSALILCSSSSEVLEVHFLCTKFLQDYKTIKSVAAING
KSERTLVAEMFNGCQILISTPRFLIRFMNKNKKLVNFKNLRYLILDDGDIILDKYFDSIS
QLFRRHNIICNRELKSKTFQIIITATYWTLHLKKIASILMENPCIYIASFMEAAIFKSMR
LNFYIINSKEKHERLLDSLGNEYSTSRTIVICANNNEAKELNNFLEKHKETLLAHGNMNY
VHLQRIKQYWNVCISGSYPILICTDDILPDIDITNVTWLIHYSIPLHSKTQFNFRFSTLL
ENLQMENSTGKVTIIMDENNDRQFLHIIKIMQRTNYVIPEKILENVKFITATLEQKKENY
PICDSIKSWGFCNKQISCALRHKIISKVDAPITDIQINDKVKFRVVSIHDATHVSARIIS
YIKFNTLKEVEFSTTEYLRINTRIQEYYSCVENRKKCETLDVGCICGLEEPVDTFKRIQI
LHIERENKTEIPKYVNVRCIDNGVILKKVDVYRLLHMPEELIEYSMQVVEVFLVGIAPHD
EEYVWNNCAIDAVYQWFKENVDDRSYVIGTVNLHLGNTIWVNTLNVGTKLIGYKDLIGSC
LRTELLEKDHAVEDDKHLNRMYQLCRDAGFLNINGYDLNL
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcagaattattgtgatacagatgctatgttaccatctactgcaacagtaatt
aaaattacaaatattttaactccatatattgtaagaatttatgaagtgaaggactataat
gaaaagttaaattctatcaataagaaattgttaaaagatgagaaaatgtttcacagtgtt
gaaaaagatatagaaccaaaaataggagatacagttatagtatataatagattagatatt
acaactgattgtcctggatggttatgcagaggatatattagtagtattgaaaatctgaaa
gatacatataatatctttttacctgattatggaatttctattgaatcacaaagagaggat
ttcattatatgttcaactggtgcaattttggaagaatatttaaccttcacagttggttta
tataatattttacctgcggatgtaaaacataacttatctgtacagaatgaaactctaata
attttagaggaatggagcacatctgcaatcgaatacacaaaggaattaataagtgcatct
gatatagtctattttgatcatatagtatctgatcagtatggaaaatattatggtgaattt
tatctcaatataaaaaacaaaataatatgtttaagtgaagctttagttctacaccaatat
gctatttatttaaataaaaaattgttgcagtttatagaaagttcaatgaatagtgaaaaa
ttaaataaagaaataatcaatgatgaaactgtattttatttaaatgtttcacaagtgttg
gatagaactagtgaaagaaaaaagcaaaaggaaagtttcctaaaaagagcgaaatttaaa
aaaggcaattatttacaccatgaacttcaaagagatgaagaaaaagtattaatttatgga
atggataaatatgaatggttaagttctacattagatgcaaaattccctgcagaaatacac
aaggcttggaaatcattgatacagtcatgtaaaccaaggaaaatacagtcatatatatgg
cctgctataaaaaaaggtttagacacggtagcaattggaacagcaaaatgtggtaaaact
attggatatatatttgctatttgtggacttttggctacaaattccaatcttcctcgagga
gtaaatccatctgcattgatactatgttcttcctcatctgaggtactagaagttcatttt
ttatgcacaaaattcctacaagactataaaacgataaaatctgttgctgcaattaatggt
aaatcagaaagaacattagtggctgaaatgtttaatggatgtcagatactaatctctaca
ccaagatttttaatacgcttcatgaataaaaacaaaaaattagtgaattttaaaaatctt
cgatatttaattttggatgatggtgatattatcttggataaatattttgattctataagt
caattatttagacgacacaatattatttgtaacagagaattaaaaagtaagacgtttcaa
attataataactgcgacatactggacactgcatttaaaaaaaattgcctctattctaatg
gaaaatccatgcatatatatagcatcttttatggaagccgcaatttttaaatctatgcgt
ttaaatttttatataataaattcaaaggaaaaacatgaaagacttttagattcattaggt
aatgagtattccacctcacgaactatagtaatttgtgcaaataataacgaagctaaagag
ttaaataacttcttagaaaaacataaagagactcttttagctcatggaaatatgaactat
gttcacttacaacgtattaagcaatattggaatgtttgtataagtggttcttatccaatt
ttaatatgtacagatgatatattaccagatatagatattacaaatgtaacttggttgata
cattattcaattcctttgcattcaaagacacaatttaattttcggttctctacacttcta
gaaaatttacaaatggaaaatagcactggaaaagtaactataataatggatgaaaataat
gacagacagtttttacatataataaaaataatgcaacgtacgaattatgtcattcctgaa
aagatattagaaaatgttaagtttataacagctactttagaacagaaaaaggaaaattat
cctatttgtgacagtataaagtcttggggattttgtaacaaacaaatttcttgtgcattg
agacataaaataatttcaaaagttgatgccccaattacggacattcaaataaacgacaag
gtaaagttcagagtagtgagcatacatgatgctacacatgtttctgcaaggattatatca
tatatcaaatttaatacattaaaagaagtagaattttctactactgaatatctgcgaatt
aacacaagaatccaagagtactattcttgtgtggaaaacagaaagaaatgtgagaccctc
gatgtgggatgtatatgtggcttggaagaaccagtagatacttttaagaggatacaaatt
ttacatattgaaagagaaaataaaacagaaattccaaagtatgtaaatgtaagatgtatt
gacaatggggtaattttgaagaaagtagatgtatatagattgttacatatgccagaagaa
cttatagaatattctatgcaagtagtagaagtatttttagttggtatagctccgcatgat
gaagaatatgtttggaataattgtgcaattgatgctgtgtaccagtggtttaaagaaaat
gttgatgataggtcctatgtgattggaacggtaaatttacatctgggaaatacaatatgg
gtaaatactttgaatgttggaacaaaattaattggatataaagatttaattggttcatgt
ttaagaacagaattattagaaaaagatcacgctgttgaagatgacaaacatttaaatcgg
atgtatcaactttgtagggatgctgggtttttgaacataaatggatatgatttaaatctt
taa
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