KEGG   Bombus pascuorum (common carder bee): 132915223
Entry
132915223         CDS       T09597                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 7 isoform X1
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
bpas  Bombus pascuorum (common carder bee)
Pathway
bpas03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpas00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    132915223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpas03019]
    132915223
Messenger RNA biogenesis [BR:bpas03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     132915223
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     132915223
SSDB
Motif
Pfam: CAF1 YceM-like_C RNase_H_2
Other DBs
NCBI-GeneID: 132915223
NCBI-ProteinID: XP_060830962
EnsemblRapid: ENSBPAG00000005686
LinkDB
Position
1:25237561..25241392
AA seq 302 aa
MPSATGGNNPIGQQKGGATMPSNEECGIRDVWGHNLEEEFRTIRQVVQQYQYIAMDTEFP
GVVARPIGEFRTSADYQYQLLRCNVDLLRIIQLGLTFLDESGNTPGGSYTTWQFNFKFNL
QEDMYAQDSIDMLQNSGIQFKKHEEEGIDPLDFAELLMTSGIVLVDDIKWLSFHSGYDFG
YLLKLLTDQNLPQEESEFFELLRIYFPTIYDVKYLMKSCKNLKGGLQEVAEQLEIQRVGP
QHQAGSDSLLTGMVFFKMREMFFEDNIDDAKYCGHLYGLGTSFVVNGSGGYLDSNGDNSS
SS
NT seq 909 nt   +upstreamnt  +downstreamnt
atgccctcagctaccggaggaaataaccctatagggcaacagaagggtggggcgactatg
cccagtaatgaagaatgtgggatccgagatgtttggggacataatctcgaagaagaattt
cgaacaattcggcaagtcgtgcagcagtatcaatatattgcaatggacactgaatttcca
ggagtagttgctagacccattggcgaatttaggactagcgccgattatcaatatcagtta
ttacgatgtaatgtagatctcttgcggataatccaacttggtcttacatttctcgatgaa
tcgggaaatacacctggtggtagttacacgacgtggcaatttaatttcaaattcaattta
caagaggatatgtatgcgcaagatagtatagatatgctgcaaaacagtggtatacaattt
aaaaaacacgaagaagagggtatcgatccgttagattttgccgaattattaatgacatcg
ggaattgttcttgttgacgacataaaatggctatcctttcattctggttacgattttggc
tatctattgaaacttcttacagatcaaaatttaccccaagaagaaagtgaattttttgaa
cttcttaggatatattttccaacaatatatgatgtaaaatatttaatgaaatcttgcaaa
aatttgaaaggaggcctacaagaggtagcagagcaattggaaattcaaagagttggtccc
caacatcaggctggttctgattcgttacttacgggaatggttttctttaaaatgcgagag
atgttttttgaagataatattgatgatgcgaaatattgtggccatttatatggtttggga
acatcatttgtcgtaaacggttcaggaggatacctagacagtaatggagataattcttcg
tcttcgtaa

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