Bombus pascuorum (common carder bee): 132915506
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Entry
132915506 CDS
T09597
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132915506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132915506
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
132915506
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
132915506
NCBI-ProteinID:
XP_060831390
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All DBs
Position
1:complement(6416972..6693728)
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AA seq
712 aa
AA seq
DB search
MADDKTEFDWGNEKLQRAQKTVDESSYDLEAWSILIREAQNRPIIEVRPVFEKLVSVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLATYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVTFLKSVEAVGSYAENQKISAVRKVYQRGVVNPMINM
EQLWKDYMAFEQNINPIIAEKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHP
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATSTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRCKHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEKSVD
IWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLDLYPCTPMEL
RSIGYMEVSSVGRSTVGALPRIPDPEEAIASLPRPDLSQMIPYKPKVNPLPGEHPVPGGS
FPLPPAAAQLCTMLPPPGCFRGPFVAVDLLMDVFNRIQLPDHAPLPVADNGCDTKLFDLA
KSVHWIVDESNDGISIGSKRKRARLGDDSEEEDLPPPPANDIYRQRQQKRVK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgataaaacagaatttgattggggaaatgaaaaattacaacgtgctcaaaaa
acggtggatgaatcttcttatgatttggaagcatggagcatccttatcagagaagcacaa
aacagacccattatagaagtaaggccagtgtttgaaaaacttgtgtccgtgtttccctct
gcgggccgatattggaaaatttatatagaacaagagatgaaaatgcgcaactttgaaaag
gtggaaaagcttttccaaaggtgcctcatgaaaatcttaaatattgagttgtggaaactc
tacctttcttacgtgaaggaaacaaaagccagtcttgcaacatacaaggaaaaaatggca
caagcatatgattttgcactggataaaattggtatggatatccattcctatagtatatgg
aatgattacgttacattccttaaaagtgtggaagctgttggttcatatgctgagaaccag
aaaattagtgcagtgagaaaggtgtatcaacgaggtgtagttaatccaatgataaatatg
gaacaattatggaaagattatatggcttttgaacaaaatattaatccaataattgcagag
aaaatggctattgaacgttctagagattatatgaacgcaagacgagttgccaaagaatta
gaagctgtaacaagaggattgaatcgaagtgctcctagtgtacctccaactggtcatcca
gaagaagttaaacaggttgaattgtggaagaaatatattgcatgggaacgtagtaaccct
ttaagaactgaagatacttctttagttgctcgcagagtaatgtttgctatagaacagtgt
ttattatgtttgggtcatcatcctgcagtgtggcatcaagctgcacatttcttagaactt
agctcaaaaatattaacagagaaaggagatgtaaatgctgcaaaaaatttaagcgatgaa
gcagcaacaatgtttgaaagagcaacaagtacattgttgtctaaaaatatgttattatat
tttgcgcatgcggattttgaagaaggaagagtaaaatatgaaaaagttcatcaaatatat
caaaagttccttgatatacctgacattgaccctacacttgcgtatgtacaatacatgaaa
ttcgcaagacgcgctgaaggtataaaatcggctagaacggtttttaaaagagctcgcgaa
gatccaaggtgtaaacatcatgtatatgtagctgctgcattaatggaatattattgcacg
aaggataaaaatattgcttttcggatattcgaattaggtttaaagaaatttggggacaat
cctgactatatactttgttatatcgactatctgtcacatttgaatgaggacaataataca
agagttttattcgagagagttttatcatctggtagtttagaacctgaaaaatcagtcgat
atatggaaccgatttttggaatttgaatctaatattggagatctagcaagtattgtaaaa
gttgaaaaacgacgtagtgctgttttagaaaagatcaaagaattcgaaggtaaagaaaca
gcacaattagtagatagatataaattcttggatctatatccatgtactcctatggagtta
cggtccatcggatatatggaagtatccagcgttggaagaagtacagttggtgcattacca
cgaataccagatccagaggaagctatagcatcattgccaaggcctgatttatcacaaatg
ataccttataagccaaaagtaaatccactacctggagagcatccagtacctggtggatct
tttccattaccaccagctgcagcacaactttgtacgatgcttcctccacctggatgcttc
agaggaccatttgtagctgttgatttgctcatggatgttttcaatcgaattcagttacca
gaccatgctccattgccagtggcagataacggatgtgatacaaaattatttgacctagcg
aaatccgtacattggatagtcgatgaaagtaacgatgggatcagtattggatccaaacgt
aaaagagcgcgcttaggtgatgacagtgaagaagaagacttgccacctccacctgcaaat
gacatatatcgccaaagacagcaaaaacgagtcaagtaa
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