KEGG   Bombus pascuorum (common carder bee): 132916085
Entry
132916085         CDS       T09597                                 
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
bpas  Bombus pascuorum (common carder bee)
Pathway
bpas04512  ECM-receptor interaction
bpas04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:bpas00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    132916085
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132916085
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bpas04147]
    132916085
   00536 Glycosaminoglycan binding proteins [BR:bpas00536]
    132916085
Exosome [BR:bpas04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   132916085
Glycosaminoglycan binding proteins [BR:bpas00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   132916085
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 132916085
NCBI-ProteinID: XP_060831838
LinkDB
Position
1:complement(1771200..1797596)
AA seq 1948 aa
MTRLGLRFVASAVFLAGIVGGQFNHTSWPYNPPPVVPLGRGDIGKPNSTDDDYNISPRWR
AFVTNNEDSEEDRRYLNNQGQGYQGQNYDDRYNRYPDGDEYNQRTDDSGGYQTNYGGLDQ
ESYNQGQDQVPLDPYNQEAGDPYGRSGGYEDSYGRGEAGGDQRSRDSSGDGYDRNYGSRD
DYGRGDPYGQRGDPYGQRGYSPGQRGGYGAAGDSDNYPSSYTVVPVPGYKPQRNCTGSAC
CVPKCFAEKGSRGPPGVMGPQGPKGQKGFPGTEGLLGPKGEKGDPGPQGLRGPKGDRGKM
GIPGFSGISGVPGVQGPPGAPGLPGRDGCNGTDGEPGHAGRPGDTGPRGYPGPRGPKGDK
GQSGFAGRFPVGQKGEPGIDGVRGPPGQPGSQGERGFPGPKGDRGPYGPPGLQGPRGEKG
NMGLAFEGPKGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGDRGEKGDMGERGSDGQKG
EQGPIGDHGIPGTAGMKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLPGRPG
QKGEPGRDGSMGVPGLRGPPGPPGGGKGTPGPPGPKGPQGFPGPTGPRGADGYPGDPGPR
GPIGPPGGPGLAGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLAGSRGLPGEK
GASIMGPKGMDGAPGIDGEKGQKGERGYAGPRGVPGDVDGIPGAPGEPGLPGEPGTPGKN
GIPGFPGSPGEKGEIGGRCIDCMPGFPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPGSD
GLPGPIGPPGPPGKDGIPGAAGPQGEPGTPAVVTENMLKVEKGDKGVRGPVGRDGPPGLP
GPPGEKGPMGFEGFPGPKGIAGDRGFPGQDGIPGRPCAPGRKGEPGLSVKGEHGEPGRRG
ETGAKGEPGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDGLSGDKGLQGI
SGPPGPPGSIGAPGPVGPRGLPGPRGDKGNIGPMGFPGEPGREGPRGFPGAAGLKGAKGE
VGISVKGSPGLPGPPGEKGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAP
GEKGDTGPMGPPGPPGVAGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSK
GYPGRRGLPGLQGRPGIEGAPGLKGERGEKGAAGFPGLRGMEGKPGRPGLTGPKGDLGHP
GLPGLPGTIGFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPPGRDGID
GDKGERGLSCNCVDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQGDIGPMGPPG
EPGTPGIDGLPGEPGDIGPPGAPGFPGLDGDVGAPGHPGLNGGKGDRGLPGLVGEPGIRG
APGEKGDRGQPGPTVAIKGEKGEPGMPGLRGVAGEKGDRGEEGLAGYDGEKGDRGTSGPV
GNPGPPGLPGPKGEEGPRGPTGIAGLTIKGEKGLPGLPGKHGREGLPGRPGEKGERGLPG
LPGHKGDQGPYGPVGPQGEKGDMGLMGSPGLPGQDGAPGHRGLPGQIGPKGEKGVNCIPE
PGLPGQKGEPGYPGLPGTDGLPGEKGDRGWPGLEGPPGLDGEKGERGFPGPIGKMGAIGF
AGQKGDRGLDCLEPPMGPKGDRGYPGPTGPPGPSGEKGASGQPGFPGLHGTKGAPGLQGP
PGPVGLPGLQGPVGAPGLPGLQGPVGHPGEPGEPGLPCEAAPDYLTGILLVKHSQTDRVP
VCDAGHIQLWEGYSMLSTDGNERSHSQDLGHAGSCVRKFSTMPFLFCDTGNVCNYASRSD
RSYWLSTTKAIPMMPIEGTAIEEYISRCVVCEVPANVIAVHSQSLNIPDCPHGWTGLWIG
YSFVMHTGAGAQGGGQSLSSSGSCLEDFRTTPFIECNEEHCHYYSNEISFWMTTIEDRLQ
FQRPEKQTLKAGNLRSRISRCQVCIKNT
NT seq 5847 nt   +upstreamnt  +downstreamnt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagttggt
gggcaatttaatcacacatcatggccgtacaatcctccgcctgttgttccacttggacga
ggtgatattggaaaaccaaatagtacagacgacgattataatatttcaccacgatggaga
gcttttgttacgaacaacgaagattctgaggaagataggcggtacttaaataaccaaggc
caaggctaccaaggtcagaattacgatgatcggtacaacagatatcccgatggcgatgaa
tataatcagagaactgatgattccggcggatatcaaactaattatggaggcttggatcaa
gaatcctacaaccagggtcaagatcaagtcccgttggatccttacaatcaagaagctggc
gatccttacggaagatctggaggttacgaagactcttacggaagaggagaagccggagga
gatcaaagatccagagattcttctggcgatggctacgatagaaattatggatccagagac
gattatggacgcggagatccttacggacaacgcggagatccctacggacaacgcggatat
tctccagggcaacgtggaggatatggcgcggccggagattcggacaattatccaagcagt
tacacggttgtgccagttccaggatacaagccacaacgaaactgtaccggatcggcctgc
tgcgtgccaaaatgtttcgcggagaaaggttccagaggtccaccaggtgtaatggggcca
cagggacctaaaggtcaaaaaggatttcctggaacagaaggtcttttgggaccaaaggga
gaaaaaggtgaccctggtcctcaaggactacgcggtccgaaaggtgacagaggtaaaatg
ggtatacctggattctccggaataagtggtgttcctggtgtacaaggtccgcccggagct
cctggtctacctggtcgtgatggttgcaatggaacagacggtgaacctggtcatgctggt
cgtcctggagatacaggtcctcgtggttatccaggtcctcgagggcccaagggagacaaa
ggtcaatcagggttcgctggcaggttccctgtaggtcaaaagggagaaccgggtatcgac
ggtgtcagaggacctccaggacaaccaggatcacaaggagagcgtggatttcctggacct
aagggtgatcgtggtccttatggtccgcctggtctacaaggaccaagaggagaaaaagga
aacatgggtcttgcgtttgaaggtccgaaaggtgacaaaggtcagaagggagagcaagga
cctcccggatcgcctgcagtcggcggctttctacatccaggagaagaaatagcaggtcca
cagggagatcgtggtgaaaaaggagacatgggtgaaagagggtcggatggtcaaaaagga
gaacagggaccaattggtgatcatggtattcctggtactgcaggtatgaaaggagaaaaa
ggtcttccaggcgcaccaggtattcgtggacgggatggtttctctggacctccaggtcca
cctggacgcaaaggtgatcgaggttacgacggattagacggccttccaggtcgtcctgga
cagaaaggagaaccaggtcgagatgggtctatgggtgttccaggcttacgaggaccacct
ggtccacctggaggtgggaaaggtacaccagggcctccagggccaaaaggacctcaaggt
tttccaggacccactggacctcgcggtgccgatggatatcccggagatccaggtccaaga
ggtcctattgggccaccaggaggacctggtttagcaggtattcctggtccagagggttta
ccaggagaaaaaggagcaaaaggagaacctggcatcacaggattccctggaccaacaggt
ccccgtggatttgatggtccgccaggtttagcaggttcacgagggctgccaggagagaaa
ggcgcgtcgatcatgggtcccaaaggaatggatggagcgcccggtatagatggagagaaa
ggacaaaaaggagaacgcggttacgcaggaccgcgtggagttcctggcgacgtggatggc
attccaggagcgcccggagaacctggtttaccaggagaaccgggaacgccagggaaaaac
ggcattccaggatttccaggttcacctggtgagaagggagagataggagggcgttgtata
gattgcatgccgggattcccaggaatcaaaggtgatcgtggtttcgatggacaacctgga
cttcctggaccacgaggtccggctggagaacgaggattccccggagaacctggcagcgac
ggattacctggaccaattgggccaccagggcctccgggaaaagatggaattcctggtgca
gcaggtccacaaggagaacctggtactccagcagtggttacggaaaacatgcttaaagta
gaaaagggtgataaaggtgtgagaggtccggtaggaagagatggtccacctggtcttcct
ggtccgcctggagaaaaaggtccgatgggatttgaaggtttcccaggacccaagggtatt
gctggagatcgtggattccctggtcaagatggtattcctggaaggccatgtgctcctggt
cgaaaaggagaacctggtcttagtgtgaaaggagaacatggagaaccaggccgaagaggt
gaaacaggtgcaaagggtgaacctggtccattaggagataaaggagaacctggtctgtgt
ccaattccggatgaattaattaagggcattaaaggcgacagaggtgctcctggtgaaaaa
ggagagcctggtccacccggaagggatgggttaagcggtgacaaaggtttacaaggtatt
tcgggcccacctggaccacccggatcaattggtgcacctgggccagttggaccaagagga
ttaccaggtcctcgtggtgacaagggtaatataggaccaatgggtttccctggggaacct
ggtcgtgaaggacccagagggttcccaggcgctgcagggttgaaaggagcaaaaggtgaa
gttggtatctcggtcaagggtagtcctggattgccaggaccaccgggagaaaaaggagag
aaaggtcttccaggaccaccagggaaagaaggtcctgatggtctgccgggtctgccagga
ttttccggagagaagggtgatgcaggtattccaggcataggtggtttgcctggtgcgcca
ggagaaaagggagatactggtccgatgggacctccaggcccgcctggtgttgctggaatt
cctggtatagacggaaataaaggtgaaccgggattgccgggtgaggctggcaaaccagga
ctcccaggattcccaggtatcaaaggtgatcgtggcgaaccgggtatcgatggatcgaaa
ggttacccaggaagacgtggtctacctggtttacaaggtagacctggtatagaaggtgca
cctggtttgaaaggagaacgaggtgaaaaaggtgccgctggtttccctggattacgtgga
atggaaggaaaacctggtcgccctggattaactggaccgaaaggagatttaggtcatcct
ggtctacctggtcttcctggaactattggattccaaggacctaaaggtgatcaaggttta
ccaggattgccaggacgcaaaggagaaccaggtctcgtttctgagaaaggacagaaaggt
gaaccaggaatgccaggtatccgtggtcctgttggtcctcctggtagagatggtattgac
ggagacaagggagaacgtggattgtcgtgtaattgtgtagacggattgccaggtcttaag
ggagaaccgggtctgccaggtcgcgatggtttaccaggacctatagggctaaaaggtgac
gctggagtaagaggtttccatggttctcaaggagatataggaccaatgggtccaccaggt
gaaccaggaacacctggaatcgacggattgccaggtgaaccaggtgacataggtccacca
ggtgcacctggtttccctggtttggatggtgatgtgggagctccaggacatcctggcctc
aatggtggtaaaggagaccgtggtttgccaggtcttgttggggaacctggtatccgtggt
gcgcctggagaaaaaggtgaccggggacaacctggaccgacagttgcgatcaaaggtgaa
aaaggtgaaccaggtatgccaggattacgaggtgtagctggagagaaaggtgatcgtggc
gaggaaggtctagctggttatgatggcgaaaaaggagataggggcacatcgggtccagtt
ggaaacccaggtccacctggcctccctggacctaaaggtgaagaaggtccacgtggacct
acgggaattgctggactaactatcaagggtgagaagggtttaccaggtctgccaggaaag
cacggacgagaaggactaccaggacgaccaggagagaagggagaacgaggattacctggt
ttaccaggacataaaggagatcagggaccttatggtcctgtcgggccacagggcgagaaa
ggtgatatggggcttatgggctctcccggtttaccaggtcaagatggagctccaggtcat
agaggactcccgggtcaaataggtccaaaaggtgaaaaaggtgtgaattgtataccagaa
ccaggtttgccaggacaaaagggagaaccaggatacccaggacttcccggaactgatgga
ctccctggtgaaaaaggtgacagaggttggcccggtctagaaggtccacctggtctggat
ggagagaaaggtgaaagaggattcccaggtcccataggaaaaatgggtgctattgggttt
gctggtcagaagggtgacaggggtctcgactgcctcgaaccaccgatgggaccaaaagga
gaccgtggttaccctggaccgactggcccgccaggcccgtcaggagaaaaaggagcttca
ggtcagccaggattcccaggattgcatggaacgaaaggtgcaccaggacttcaaggacca
ccaggtccagttggattaccaggattgcaaggacctgttggtgctcctggtttgccaggt
cttcaaggacccgtgggtcatccgggtgaaccaggagaaccaggactaccatgcgaagct
gcacctgattaccttactggtatcttgctggtaaaacacagccaaactgacagggtgcct
gtttgcgatgcaggacatatccaactctgggaaggatacagtatgttgtctacggatggc
aatgaaagatcccactcacaagatttaggtcacgccggctcgtgcgtacgaaagttctcg
acgatgccgttcctcttctgcgacactggcaacgtttgtaactatgcaagtcgtagcgat
cgttcttactggttgtcgaccactaaagcaattcccatgatgcctatcgaggggacagcg
atagaggaatacatctccagatgcgtggtttgcgaggttccagcgaatgtgatagccgta
cacagccagtcattgaatattccagattgtccacacggatggaccggactttggatcgga
tacagttttgtcatgcatacgggtgccggtgcccagggtggaggacaatccttgtccagt
tccggatcctgtctcgaagatttccgtacaacgccatttatcgaatgtaacgaagaacac
tgccattattactcgaacgagatcagcttttggatgacgacgatagaggataggcttcag
ttccaaaggcctgagaaacagaccttgaaggcaggcaacctcaggtcccgaataagtcgc
tgccaagtgtgtataaagaacacgtaa

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