Entry |
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Name |
(RefSeq) collagen alpha-1(IV) chain
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KO |
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Organism |
bpas Bombus pascuorum (common carder bee)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:bpas00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132916085
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132916085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:bpas04147]
132916085
00536 Glycosaminoglycan binding proteins [BR:bpas00536]
132916085
Exosome [BR:bpas04147]
Exosomal proteins
Exosomal proteins of other cancer cells
132916085
Glycosaminoglycan binding proteins [BR:bpas00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
132916085
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:complement(1771200..1797596)
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AA seq |
1948 aa
MTRLGLRFVASAVFLAGIVGGQFNHTSWPYNPPPVVPLGRGDIGKPNSTDDDYNISPRWR
AFVTNNEDSEEDRRYLNNQGQGYQGQNYDDRYNRYPDGDEYNQRTDDSGGYQTNYGGLDQ
ESYNQGQDQVPLDPYNQEAGDPYGRSGGYEDSYGRGEAGGDQRSRDSSGDGYDRNYGSRD
DYGRGDPYGQRGDPYGQRGYSPGQRGGYGAAGDSDNYPSSYTVVPVPGYKPQRNCTGSAC
CVPKCFAEKGSRGPPGVMGPQGPKGQKGFPGTEGLLGPKGEKGDPGPQGLRGPKGDRGKM
GIPGFSGISGVPGVQGPPGAPGLPGRDGCNGTDGEPGHAGRPGDTGPRGYPGPRGPKGDK
GQSGFAGRFPVGQKGEPGIDGVRGPPGQPGSQGERGFPGPKGDRGPYGPPGLQGPRGEKG
NMGLAFEGPKGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGDRGEKGDMGERGSDGQKG
EQGPIGDHGIPGTAGMKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLPGRPG
QKGEPGRDGSMGVPGLRGPPGPPGGGKGTPGPPGPKGPQGFPGPTGPRGADGYPGDPGPR
GPIGPPGGPGLAGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLAGSRGLPGEK
GASIMGPKGMDGAPGIDGEKGQKGERGYAGPRGVPGDVDGIPGAPGEPGLPGEPGTPGKN
GIPGFPGSPGEKGEIGGRCIDCMPGFPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPGSD
GLPGPIGPPGPPGKDGIPGAAGPQGEPGTPAVVTENMLKVEKGDKGVRGPVGRDGPPGLP
GPPGEKGPMGFEGFPGPKGIAGDRGFPGQDGIPGRPCAPGRKGEPGLSVKGEHGEPGRRG
ETGAKGEPGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDGLSGDKGLQGI
SGPPGPPGSIGAPGPVGPRGLPGPRGDKGNIGPMGFPGEPGREGPRGFPGAAGLKGAKGE
VGISVKGSPGLPGPPGEKGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAP
GEKGDTGPMGPPGPPGVAGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSK
GYPGRRGLPGLQGRPGIEGAPGLKGERGEKGAAGFPGLRGMEGKPGRPGLTGPKGDLGHP
GLPGLPGTIGFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPPGRDGID
GDKGERGLSCNCVDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQGDIGPMGPPG
EPGTPGIDGLPGEPGDIGPPGAPGFPGLDGDVGAPGHPGLNGGKGDRGLPGLVGEPGIRG
APGEKGDRGQPGPTVAIKGEKGEPGMPGLRGVAGEKGDRGEEGLAGYDGEKGDRGTSGPV
GNPGPPGLPGPKGEEGPRGPTGIAGLTIKGEKGLPGLPGKHGREGLPGRPGEKGERGLPG
LPGHKGDQGPYGPVGPQGEKGDMGLMGSPGLPGQDGAPGHRGLPGQIGPKGEKGVNCIPE
PGLPGQKGEPGYPGLPGTDGLPGEKGDRGWPGLEGPPGLDGEKGERGFPGPIGKMGAIGF
AGQKGDRGLDCLEPPMGPKGDRGYPGPTGPPGPSGEKGASGQPGFPGLHGTKGAPGLQGP
PGPVGLPGLQGPVGAPGLPGLQGPVGHPGEPGEPGLPCEAAPDYLTGILLVKHSQTDRVP
VCDAGHIQLWEGYSMLSTDGNERSHSQDLGHAGSCVRKFSTMPFLFCDTGNVCNYASRSD
RSYWLSTTKAIPMMPIEGTAIEEYISRCVVCEVPANVIAVHSQSLNIPDCPHGWTGLWIG
YSFVMHTGAGAQGGGQSLSSSGSCLEDFRTTPFIECNEEHCHYYSNEISFWMTTIEDRLQ
FQRPEKQTLKAGNLRSRISRCQVCIKNT |
NT seq |
5847 nt +upstreamnt +downstreamnt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagttggt
gggcaatttaatcacacatcatggccgtacaatcctccgcctgttgttccacttggacga
ggtgatattggaaaaccaaatagtacagacgacgattataatatttcaccacgatggaga
gcttttgttacgaacaacgaagattctgaggaagataggcggtacttaaataaccaaggc
caaggctaccaaggtcagaattacgatgatcggtacaacagatatcccgatggcgatgaa
tataatcagagaactgatgattccggcggatatcaaactaattatggaggcttggatcaa
gaatcctacaaccagggtcaagatcaagtcccgttggatccttacaatcaagaagctggc
gatccttacggaagatctggaggttacgaagactcttacggaagaggagaagccggagga
gatcaaagatccagagattcttctggcgatggctacgatagaaattatggatccagagac
gattatggacgcggagatccttacggacaacgcggagatccctacggacaacgcggatat
tctccagggcaacgtggaggatatggcgcggccggagattcggacaattatccaagcagt
tacacggttgtgccagttccaggatacaagccacaacgaaactgtaccggatcggcctgc
tgcgtgccaaaatgtttcgcggagaaaggttccagaggtccaccaggtgtaatggggcca
cagggacctaaaggtcaaaaaggatttcctggaacagaaggtcttttgggaccaaaggga
gaaaaaggtgaccctggtcctcaaggactacgcggtccgaaaggtgacagaggtaaaatg
ggtatacctggattctccggaataagtggtgttcctggtgtacaaggtccgcccggagct
cctggtctacctggtcgtgatggttgcaatggaacagacggtgaacctggtcatgctggt
cgtcctggagatacaggtcctcgtggttatccaggtcctcgagggcccaagggagacaaa
ggtcaatcagggttcgctggcaggttccctgtaggtcaaaagggagaaccgggtatcgac
ggtgtcagaggacctccaggacaaccaggatcacaaggagagcgtggatttcctggacct
aagggtgatcgtggtccttatggtccgcctggtctacaaggaccaagaggagaaaaagga
aacatgggtcttgcgtttgaaggtccgaaaggtgacaaaggtcagaagggagagcaagga
cctcccggatcgcctgcagtcggcggctttctacatccaggagaagaaatagcaggtcca
cagggagatcgtggtgaaaaaggagacatgggtgaaagagggtcggatggtcaaaaagga
gaacagggaccaattggtgatcatggtattcctggtactgcaggtatgaaaggagaaaaa
ggtcttccaggcgcaccaggtattcgtggacgggatggtttctctggacctccaggtcca
cctggacgcaaaggtgatcgaggttacgacggattagacggccttccaggtcgtcctgga
cagaaaggagaaccaggtcgagatgggtctatgggtgttccaggcttacgaggaccacct
ggtccacctggaggtgggaaaggtacaccagggcctccagggccaaaaggacctcaaggt
tttccaggacccactggacctcgcggtgccgatggatatcccggagatccaggtccaaga
ggtcctattgggccaccaggaggacctggtttagcaggtattcctggtccagagggttta
ccaggagaaaaaggagcaaaaggagaacctggcatcacaggattccctggaccaacaggt
ccccgtggatttgatggtccgccaggtttagcaggttcacgagggctgccaggagagaaa
ggcgcgtcgatcatgggtcccaaaggaatggatggagcgcccggtatagatggagagaaa
ggacaaaaaggagaacgcggttacgcaggaccgcgtggagttcctggcgacgtggatggc
attccaggagcgcccggagaacctggtttaccaggagaaccgggaacgccagggaaaaac
ggcattccaggatttccaggttcacctggtgagaagggagagataggagggcgttgtata
gattgcatgccgggattcccaggaatcaaaggtgatcgtggtttcgatggacaacctgga
cttcctggaccacgaggtccggctggagaacgaggattccccggagaacctggcagcgac
ggattacctggaccaattgggccaccagggcctccgggaaaagatggaattcctggtgca
gcaggtccacaaggagaacctggtactccagcagtggttacggaaaacatgcttaaagta
gaaaagggtgataaaggtgtgagaggtccggtaggaagagatggtccacctggtcttcct
ggtccgcctggagaaaaaggtccgatgggatttgaaggtttcccaggacccaagggtatt
gctggagatcgtggattccctggtcaagatggtattcctggaaggccatgtgctcctggt
cgaaaaggagaacctggtcttagtgtgaaaggagaacatggagaaccaggccgaagaggt
gaaacaggtgcaaagggtgaacctggtccattaggagataaaggagaacctggtctgtgt
ccaattccggatgaattaattaagggcattaaaggcgacagaggtgctcctggtgaaaaa
ggagagcctggtccacccggaagggatgggttaagcggtgacaaaggtttacaaggtatt
tcgggcccacctggaccacccggatcaattggtgcacctgggccagttggaccaagagga
ttaccaggtcctcgtggtgacaagggtaatataggaccaatgggtttccctggggaacct
ggtcgtgaaggacccagagggttcccaggcgctgcagggttgaaaggagcaaaaggtgaa
gttggtatctcggtcaagggtagtcctggattgccaggaccaccgggagaaaaaggagag
aaaggtcttccaggaccaccagggaaagaaggtcctgatggtctgccgggtctgccagga
ttttccggagagaagggtgatgcaggtattccaggcataggtggtttgcctggtgcgcca
ggagaaaagggagatactggtccgatgggacctccaggcccgcctggtgttgctggaatt
cctggtatagacggaaataaaggtgaaccgggattgccgggtgaggctggcaaaccagga
ctcccaggattcccaggtatcaaaggtgatcgtggcgaaccgggtatcgatggatcgaaa
ggttacccaggaagacgtggtctacctggtttacaaggtagacctggtatagaaggtgca
cctggtttgaaaggagaacgaggtgaaaaaggtgccgctggtttccctggattacgtgga
atggaaggaaaacctggtcgccctggattaactggaccgaaaggagatttaggtcatcct
ggtctacctggtcttcctggaactattggattccaaggacctaaaggtgatcaaggttta
ccaggattgccaggacgcaaaggagaaccaggtctcgtttctgagaaaggacagaaaggt
gaaccaggaatgccaggtatccgtggtcctgttggtcctcctggtagagatggtattgac
ggagacaagggagaacgtggattgtcgtgtaattgtgtagacggattgccaggtcttaag
ggagaaccgggtctgccaggtcgcgatggtttaccaggacctatagggctaaaaggtgac
gctggagtaagaggtttccatggttctcaaggagatataggaccaatgggtccaccaggt
gaaccaggaacacctggaatcgacggattgccaggtgaaccaggtgacataggtccacca
ggtgcacctggtttccctggtttggatggtgatgtgggagctccaggacatcctggcctc
aatggtggtaaaggagaccgtggtttgccaggtcttgttggggaacctggtatccgtggt
gcgcctggagaaaaaggtgaccggggacaacctggaccgacagttgcgatcaaaggtgaa
aaaggtgaaccaggtatgccaggattacgaggtgtagctggagagaaaggtgatcgtggc
gaggaaggtctagctggttatgatggcgaaaaaggagataggggcacatcgggtccagtt
ggaaacccaggtccacctggcctccctggacctaaaggtgaagaaggtccacgtggacct
acgggaattgctggactaactatcaagggtgagaagggtttaccaggtctgccaggaaag
cacggacgagaaggactaccaggacgaccaggagagaagggagaacgaggattacctggt
ttaccaggacataaaggagatcagggaccttatggtcctgtcgggccacagggcgagaaa
ggtgatatggggcttatgggctctcccggtttaccaggtcaagatggagctccaggtcat
agaggactcccgggtcaaataggtccaaaaggtgaaaaaggtgtgaattgtataccagaa
ccaggtttgccaggacaaaagggagaaccaggatacccaggacttcccggaactgatgga
ctccctggtgaaaaaggtgacagaggttggcccggtctagaaggtccacctggtctggat
ggagagaaaggtgaaagaggattcccaggtcccataggaaaaatgggtgctattgggttt
gctggtcagaagggtgacaggggtctcgactgcctcgaaccaccgatgggaccaaaagga
gaccgtggttaccctggaccgactggcccgccaggcccgtcaggagaaaaaggagcttca
ggtcagccaggattcccaggattgcatggaacgaaaggtgcaccaggacttcaaggacca
ccaggtccagttggattaccaggattgcaaggacctgttggtgctcctggtttgccaggt
cttcaaggacccgtgggtcatccgggtgaaccaggagaaccaggactaccatgcgaagct
gcacctgattaccttactggtatcttgctggtaaaacacagccaaactgacagggtgcct
gtttgcgatgcaggacatatccaactctgggaaggatacagtatgttgtctacggatggc
aatgaaagatcccactcacaagatttaggtcacgccggctcgtgcgtacgaaagttctcg
acgatgccgttcctcttctgcgacactggcaacgtttgtaactatgcaagtcgtagcgat
cgttcttactggttgtcgaccactaaagcaattcccatgatgcctatcgaggggacagcg
atagaggaatacatctccagatgcgtggtttgcgaggttccagcgaatgtgatagccgta
cacagccagtcattgaatattccagattgtccacacggatggaccggactttggatcgga
tacagttttgtcatgcatacgggtgccggtgcccagggtggaggacaatccttgtccagt
tccggatcctgtctcgaagatttccgtacaacgccatttatcgaatgtaacgaagaacac
tgccattattactcgaacgagatcagcttttggatgacgacgatagaggataggcttcag
ttccaaaggcctgagaaacagaccttgaaggcaggcaacctcaggtcccgaataagtcgc
tgccaagtgtgtataaagaacacgtaa |