Bombus pascuorum (common carder bee): 132916085 Help Entry 132916085         CDS       T09597                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism bpas  Bombus pascuorum (common carder bee) Pathway bpas04382   Cornified envelope formation bpas04512   ECM-receptor interaction bpas04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:bpas00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     132916085  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     132916085  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     132916085  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:bpas04147]     132916085    00536 Glycosaminoglycan binding proteins [BR:bpas00536]     132916085 Exosome [BR:bpas04147]  Exosomal proteins   Exosomal proteins of other cancer cells    132916085 Glycosaminoglycan binding proteins [BR:bpas00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    132916085 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  132916085 NCBI-ProteinID:  XP_060831838 LinkDB All DBs Position 1:complement(1771200..1797596) Genome browser AA seq 1948 aa AA seqDB search MTRLGLRFVASAVFLAGIVGGQFNHTSWPYNPPPVVPLGRGDIGKPNSTDDDYNISPRWR AFVTNNEDSEEDRRYLNNQGQGYQGQNYDDRYNRYPDGDEYNQRTDDSGGYQTNYGGLDQ ESYNQGQDQVPLDPYNQEAGDPYGRSGGYEDSYGRGEAGGDQRSRDSSGDGYDRNYGSRD DYGRGDPYGQRGDPYGQRGYSPGQRGGYGAAGDSDNYPSSYTVVPVPGYKPQRNCTGSAC CVPKCFAEKGSRGPPGVMGPQGPKGQKGFPGTEGLLGPKGEKGDPGPQGLRGPKGDRGKM GIPGFSGISGVPGVQGPPGAPGLPGRDGCNGTDGEPGHAGRPGDTGPRGYPGPRGPKGDK GQSGFAGRFPVGQKGEPGIDGVRGPPGQPGSQGERGFPGPKGDRGPYGPPGLQGPRGEKG NMGLAFEGPKGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGDRGEKGDMGERGSDGQKG EQGPIGDHGIPGTAGMKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLPGRPG QKGEPGRDGSMGVPGLRGPPGPPGGGKGTPGPPGPKGPQGFPGPTGPRGADGYPGDPGPR GPIGPPGGPGLAGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLAGSRGLPGEK GASIMGPKGMDGAPGIDGEKGQKGERGYAGPRGVPGDVDGIPGAPGEPGLPGEPGTPGKN GIPGFPGSPGEKGEIGGRCIDCMPGFPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPGSD GLPGPIGPPGPPGKDGIPGAAGPQGEPGTPAVVTENMLKVEKGDKGVRGPVGRDGPPGLP GPPGEKGPMGFEGFPGPKGIAGDRGFPGQDGIPGRPCAPGRKGEPGLSVKGEHGEPGRRG ETGAKGEPGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDGLSGDKGLQGI SGPPGPPGSIGAPGPVGPRGLPGPRGDKGNIGPMGFPGEPGREGPRGFPGAAGLKGAKGE VGISVKGSPGLPGPPGEKGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAP GEKGDTGPMGPPGPPGVAGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSK GYPGRRGLPGLQGRPGIEGAPGLKGERGEKGAAGFPGLRGMEGKPGRPGLTGPKGDLGHP GLPGLPGTIGFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPPGRDGID GDKGERGLSCNCVDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQGDIGPMGPPG EPGTPGIDGLPGEPGDIGPPGAPGFPGLDGDVGAPGHPGLNGGKGDRGLPGLVGEPGIRG APGEKGDRGQPGPTVAIKGEKGEPGMPGLRGVAGEKGDRGEEGLAGYDGEKGDRGTSGPV GNPGPPGLPGPKGEEGPRGPTGIAGLTIKGEKGLPGLPGKHGREGLPGRPGEKGERGLPG LPGHKGDQGPYGPVGPQGEKGDMGLMGSPGLPGQDGAPGHRGLPGQIGPKGEKGVNCIPE PGLPGQKGEPGYPGLPGTDGLPGEKGDRGWPGLEGPPGLDGEKGERGFPGPIGKMGAIGF AGQKGDRGLDCLEPPMGPKGDRGYPGPTGPPGPSGEKGASGQPGFPGLHGTKGAPGLQGP PGPVGLPGLQGPVGAPGLPGLQGPVGHPGEPGEPGLPCEAAPDYLTGILLVKHSQTDRVP VCDAGHIQLWEGYSMLSTDGNERSHSQDLGHAGSCVRKFSTMPFLFCDTGNVCNYASRSD RSYWLSTTKAIPMMPIEGTAIEEYISRCVVCEVPANVIAVHSQSLNIPDCPHGWTGLWIG YSFVMHTGAGAQGGGQSLSSSGSCLEDFRTTPFIECNEEHCHYYSNEISFWMTTIEDRLQ FQRPEKQTLKAGNLRSRISRCQVCIKNT NT seq 5847 nt NT seq  +upstreamnt  +downstreamnt atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagttggt gggcaatttaatcacacatcatggccgtacaatcctccgcctgttgttccacttggacga ggtgatattggaaaaccaaatagtacagacgacgattataatatttcaccacgatggaga gcttttgttacgaacaacgaagattctgaggaagataggcggtacttaaataaccaaggc caaggctaccaaggtcagaattacgatgatcggtacaacagatatcccgatggcgatgaa tataatcagagaactgatgattccggcggatatcaaactaattatggaggcttggatcaa gaatcctacaaccagggtcaagatcaagtcccgttggatccttacaatcaagaagctggc gatccttacggaagatctggaggttacgaagactcttacggaagaggagaagccggagga gatcaaagatccagagattcttctggcgatggctacgatagaaattatggatccagagac gattatggacgcggagatccttacggacaacgcggagatccctacggacaacgcggatat tctccagggcaacgtggaggatatggcgcggccggagattcggacaattatccaagcagt tacacggttgtgccagttccaggatacaagccacaacgaaactgtaccggatcggcctgc tgcgtgccaaaatgtttcgcggagaaaggttccagaggtccaccaggtgtaatggggcca cagggacctaaaggtcaaaaaggatttcctggaacagaaggtcttttgggaccaaaggga gaaaaaggtgaccctggtcctcaaggactacgcggtccgaaaggtgacagaggtaaaatg ggtatacctggattctccggaataagtggtgttcctggtgtacaaggtccgcccggagct cctggtctacctggtcgtgatggttgcaatggaacagacggtgaacctggtcatgctggt cgtcctggagatacaggtcctcgtggttatccaggtcctcgagggcccaagggagacaaa ggtcaatcagggttcgctggcaggttccctgtaggtcaaaagggagaaccgggtatcgac ggtgtcagaggacctccaggacaaccaggatcacaaggagagcgtggatttcctggacct aagggtgatcgtggtccttatggtccgcctggtctacaaggaccaagaggagaaaaagga aacatgggtcttgcgtttgaaggtccgaaaggtgacaaaggtcagaagggagagcaagga cctcccggatcgcctgcagtcggcggctttctacatccaggagaagaaatagcaggtcca cagggagatcgtggtgaaaaaggagacatgggtgaaagagggtcggatggtcaaaaagga gaacagggaccaattggtgatcatggtattcctggtactgcaggtatgaaaggagaaaaa ggtcttccaggcgcaccaggtattcgtggacgggatggtttctctggacctccaggtcca cctggacgcaaaggtgatcgaggttacgacggattagacggccttccaggtcgtcctgga cagaaaggagaaccaggtcgagatgggtctatgggtgttccaggcttacgaggaccacct ggtccacctggaggtgggaaaggtacaccagggcctccagggccaaaaggacctcaaggt tttccaggacccactggacctcgcggtgccgatggatatcccggagatccaggtccaaga ggtcctattgggccaccaggaggacctggtttagcaggtattcctggtccagagggttta ccaggagaaaaaggagcaaaaggagaacctggcatcacaggattccctggaccaacaggt ccccgtggatttgatggtccgccaggtttagcaggttcacgagggctgccaggagagaaa ggcgcgtcgatcatgggtcccaaaggaatggatggagcgcccggtatagatggagagaaa ggacaaaaaggagaacgcggttacgcaggaccgcgtggagttcctggcgacgtggatggc attccaggagcgcccggagaacctggtttaccaggagaaccgggaacgccagggaaaaac ggcattccaggatttccaggttcacctggtgagaagggagagataggagggcgttgtata gattgcatgccgggattcccaggaatcaaaggtgatcgtggtttcgatggacaacctgga cttcctggaccacgaggtccggctggagaacgaggattccccggagaacctggcagcgac ggattacctggaccaattgggccaccagggcctccgggaaaagatggaattcctggtgca gcaggtccacaaggagaacctggtactccagcagtggttacggaaaacatgcttaaagta gaaaagggtgataaaggtgtgagaggtccggtaggaagagatggtccacctggtcttcct ggtccgcctggagaaaaaggtccgatgggatttgaaggtttcccaggacccaagggtatt gctggagatcgtggattccctggtcaagatggtattcctggaaggccatgtgctcctggt cgaaaaggagaacctggtcttagtgtgaaaggagaacatggagaaccaggccgaagaggt gaaacaggtgcaaagggtgaacctggtccattaggagataaaggagaacctggtctgtgt ccaattccggatgaattaattaagggcattaaaggcgacagaggtgctcctggtgaaaaa ggagagcctggtccacccggaagggatgggttaagcggtgacaaaggtttacaaggtatt tcgggcccacctggaccacccggatcaattggtgcacctgggccagttggaccaagagga ttaccaggtcctcgtggtgacaagggtaatataggaccaatgggtttccctggggaacct ggtcgtgaaggacccagagggttcccaggcgctgcagggttgaaaggagcaaaaggtgaa gttggtatctcggtcaagggtagtcctggattgccaggaccaccgggagaaaaaggagag aaaggtcttccaggaccaccagggaaagaaggtcctgatggtctgccgggtctgccagga ttttccggagagaagggtgatgcaggtattccaggcataggtggtttgcctggtgcgcca ggagaaaagggagatactggtccgatgggacctccaggcccgcctggtgttgctggaatt cctggtatagacggaaataaaggtgaaccgggattgccgggtgaggctggcaaaccagga ctcccaggattcccaggtatcaaaggtgatcgtggcgaaccgggtatcgatggatcgaaa ggttacccaggaagacgtggtctacctggtttacaaggtagacctggtatagaaggtgca cctggtttgaaaggagaacgaggtgaaaaaggtgccgctggtttccctggattacgtgga atggaaggaaaacctggtcgccctggattaactggaccgaaaggagatttaggtcatcct ggtctacctggtcttcctggaactattggattccaaggacctaaaggtgatcaaggttta ccaggattgccaggacgcaaaggagaaccaggtctcgtttctgagaaaggacagaaaggt gaaccaggaatgccaggtatccgtggtcctgttggtcctcctggtagagatggtattgac ggagacaagggagaacgtggattgtcgtgtaattgtgtagacggattgccaggtcttaag ggagaaccgggtctgccaggtcgcgatggtttaccaggacctatagggctaaaaggtgac gctggagtaagaggtttccatggttctcaaggagatataggaccaatgggtccaccaggt gaaccaggaacacctggaatcgacggattgccaggtgaaccaggtgacataggtccacca ggtgcacctggtttccctggtttggatggtgatgtgggagctccaggacatcctggcctc aatggtggtaaaggagaccgtggtttgccaggtcttgttggggaacctggtatccgtggt gcgcctggagaaaaaggtgaccggggacaacctggaccgacagttgcgatcaaaggtgaa aaaggtgaaccaggtatgccaggattacgaggtgtagctggagagaaaggtgatcgtggc gaggaaggtctagctggttatgatggcgaaaaaggagataggggcacatcgggtccagtt ggaaacccaggtccacctggcctccctggacctaaaggtgaagaaggtccacgtggacct acgggaattgctggactaactatcaagggtgagaagggtttaccaggtctgccaggaaag cacggacgagaaggactaccaggacgaccaggagagaagggagaacgaggattacctggt ttaccaggacataaaggagatcagggaccttatggtcctgtcgggccacagggcgagaaa ggtgatatggggcttatgggctctcccggtttaccaggtcaagatggagctccaggtcat agaggactcccgggtcaaataggtccaaaaggtgaaaaaggtgtgaattgtataccagaa ccaggtttgccaggacaaaagggagaaccaggatacccaggacttcccggaactgatgga ctccctggtgaaaaaggtgacagaggttggcccggtctagaaggtccacctggtctggat ggagagaaaggtgaaagaggattcccaggtcccataggaaaaatgggtgctattgggttt gctggtcagaagggtgacaggggtctcgactgcctcgaaccaccgatgggaccaaaagga gaccgtggttaccctggaccgactggcccgccaggcccgtcaggagaaaaaggagcttca ggtcagccaggattcccaggattgcatggaacgaaaggtgcaccaggacttcaaggacca ccaggtccagttggattaccaggattgcaaggacctgttggtgctcctggtttgccaggt cttcaaggacccgtgggtcatccgggtgaaccaggagaaccaggactaccatgcgaagct gcacctgattaccttactggtatcttgctggtaaaacacagccaaactgacagggtgcct gtttgcgatgcaggacatatccaactctgggaaggatacagtatgttgtctacggatggc aatgaaagatcccactcacaagatttaggtcacgccggctcgtgcgtacgaaagttctcg acgatgccgttcctcttctgcgacactggcaacgtttgtaactatgcaagtcgtagcgat cgttcttactggttgtcgaccactaaagcaattcccatgatgcctatcgaggggacagcg atagaggaatacatctccagatgcgtggtttgcgaggttccagcgaatgtgatagccgta cacagccagtcattgaatattccagattgtccacacggatggaccggactttggatcgga tacagttttgtcatgcatacgggtgccggtgcccagggtggaggacaatccttgtccagt tccggatcctgtctcgaagatttccgtacaacgccatttatcgaatgtaacgaagaacac tgccattattactcgaacgagatcagcttttggatgacgacgatagaggataggcttcag ttccaaaggcctgagaaacagaccttgaaggcaggcaacctcaggtcccgaataagtcgc tgccaagtgtgtataaagaacacgtaa

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