Bombus pascuorum (common carder bee): 132916259
Help
Entry
132916259 CDS
T09597
Name
(RefSeq) protein HBS1 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132916259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132916259
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132916259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-GeneID:
132916259
NCBI-ProteinID:
XP_060832086
LinkDB
All DBs
Position
2:complement(2356815..2361556)
Genome browser
AA seq
722 aa
AA seq
DB search
MSRHRDVRCMNYSEEYEGYDDVYGHSVEDDYCVSPSAEQFLFDRSKQQNIASFITEPDII
EGNEDNEELPISFNDENVTLTDIEWGKLMSCMESIKTVIGDTVPESEIKKKIIQSNFDVK
IALDLILEESSPKTATGSSMANKDNLEPHPDAASVKPQSNPFIIPKLSFNKQENIEGKKL
SSKYTFQATTPSNVKIIPAGKRSVVKGFNISGTENSDLLNSRIESPRSQSPYSDYNSPEV
KRKENIVSKEKRATSSNANSPRCQSPVSGHQTPDLDPKIKFNEEKDVTKIYKDKRGDSKE
QLHLIVVGHVDAGKSTLLGRLLCELGEVPTRLIHKYQQESKKIGKQSFAYAWVLDETGEE
RERGITMDVGHSKFETETKCITLLDAPGHKDFIPNMIIGATQADVALLVVDATRGEFETG
FDSGGQTREHALLLRSLGISQLTVVINKLDTVDWSKERFDEIVGKMSVFLKQAGFKDNVT
FVPCSGLSGENILTKPKEPLSNWYTGPTLVNVINNFKCPERQIDKPFRFSVNDIFKGTGS
GFCVSGHVETGMAALGDKVLVLPRNETAVIKGLQIDEVSITNAFAGDQVSLILSGIDQQN
VGIGDIICNPQNPVPVTTRFQAHVVVFAVKIPIMKGLPVIIHQQSLVQPAVITKLVAQLH
RSTGEIIKKKPRCLPKNSSAIIEITTQNSVCMELYKDIKQLGRIMLRVEGTTIAAGLITK
IK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcatcgcgatgtacgatgcatgaattattcagaagaatacgaaggttacgat
gatgtctatggacattctgtagaagatgactactgtgtatctcctagtgctgaacaattt
ttatttgatcgaagtaagcaacagaatattgcatcctttattacggaaccagatataata
gaaggcaacgaagataatgaagaacttccaatatctttcaacgatgaaaatgtaacactt
acagacatcgaatggggcaagctcatgtcatgcatggaatctataaaaactgttatagga
gacacagtacctgagtctgagatcaaaaagaaaattattcaatcaaattttgatgttaaa
atagcacttgatttaatattagaagaatcttctccaaaaactgctactggttcatctatg
gctaataaggataatttagaaccacatccagatgctgcatctgttaagcctcagtctaat
ccattcattatacccaaattatcatttaacaaacaagagaatattgaaggtaaaaaattg
tcatccaaatatacatttcaagctacaacaccttccaatgtgaaaattattcccgctggg
aaacgatctgttgtaaaaggctttaatataagcggaactgaaaatagtgatctattgaat
tcccgtattgaaagtcctcgctctcaaagcccatattctgattataatagtccagaagta
aaaagaaaggaaaatatagtctcaaaagaaaaaagagcaacttcttcgaacgcaaatagc
ccgcgatgccagtccccagtatcagggcatcaaacacctgacttggatcctaaaataaaa
ttcaatgaagaaaaagatgttacaaagatttataaagataaaagaggagacagtaaagaa
caattacatttaattgtggttggtcatgtagatgctggtaaaagtactttattaggacga
cttttatgcgagttaggagaagttccaacaagattaattcacaaatatcaacaagaaagt
aaaaaaatagggaaacaatcatttgcttatgcatgggtccttgatgaaacaggagaagaa
agggaacgtggaataactatggatgttggtcattctaaatttgaaacagaaacaaaatgt
attactttattagatgcacctgggcataaggatttcatacctaatatgattattggtgct
actcaagctgatgtagctttgttagtagtagatgctactagaggagaatttgaaactggt
tttgacagtggaggtcaaactagagaacatgcactattattacgttcattaggtatatca
cagttgacagtagtaataaataaattagatacagtagattggtcaaaggagagatttgat
gaaatagtaggcaaaatgagtgtatttttgaaacaagctgggttcaaggataatgttact
tttgttccttgtagtggtctatctggtgaaaatatattaacaaagcctaaagaaccttta
tctaattggtatacaggacctacattagtcaacgttattaataatttcaagtgtcctgaa
cgtcaaatagataaaccatttcgattttcggttaacgatatatttaaaggcacaggatct
ggattctgtgtgtctggtcacgtagaaacaggcatggcagctttaggtgataaagttcta
gtattaccgcgaaatgaaactgcagtgatcaaaggtttacaaatagatgaagtatctata
acaaacgcatttgctggagatcaagtttctttaatattatctggaattgatcaacaaaac
gttgggattggagatattatttgtaatcctcaaaatccagttcctgtaacaacacgtttc
caagcacatgttgttgtatttgcagtgaaaatacctattatgaaaggtcttcctgtaata
attcaccaacaatctttagttcaaccagctgttattacaaaactggtagcgcaacttcat
aggagtactggtgaaataataaaaaagaaaccacgctgtttaccaaaaaattcaagtgct
attattgagattacaacacaaaattcagtttgtatggaattatataaggatatcaaacaa
ctgggtagaattatgttacgtgtagaaggaactactattgcagctggtctaattacaaaa
atcaaataa
DBGET
integrated database retrieval system
