Bombus pascuorum (common carder bee): 132916265
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Entry
132916265 CDS
T09597
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132916265
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
132916265
3'-5' decay
Other 3'-5' decay factors
132916265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
UvrD-helicase
ResIII
AAA_22
UvrD_C
AAA_5
AAA_7
Mg_chelatase
PAM2
Motif
Other DBs
NCBI-GeneID:
132916265
NCBI-ProteinID:
XP_060832104
LinkDB
All DBs
Position
1:complement(8386847..8391405)
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AA seq
913 aa
AA seq
DB search
MVDHSYRMNEEVKTDFPSGFAEKVHYDWVKSKNPETIITSRDTNNVLIFSNKSLCCRSTI
NDVTYCWDFQIVTNGKQLQRIALTLDENRSNFVLKSVICDNINIGITNGQEWYNPELNNS
NANENALSGEEHYVVKICFIAHKYGTYRQNVIFYFGEYPVIIQKICMDSVPTGDLTRIDE
ATNYQFSQNPMMWNNETYQICWFNSPFVSMKDPKEDTLCMTYPYPNRNNFFLTQESLTDD
CLTPENYRGRLHELITVEELARHEQIARYNETSYMRLHSYYILSAGDGSTIAKYAPPGEL
FAQLPLSRSISEDTKSGRLFLRGCNKVLLKSLTQPSNVIYEAYIEDKCTQTVYIRLSKEC
VYALNLVANMDVHVQVQFLLNRLPFCEWHKSVDSLPDIGLVFLNTVYRNMEEDSPLNLLK
RSSSNMGYSLLNVEQEHALAVITASTNISMPPILLLGPFGTGKTFTIAQALRILLIGSSE
YKILLCTHSNSAADLYVKEFFDTWYKCDKNPRLKPVRIYYKGRSRNTVHPVVQQYSLMKD
NGTFREPTEEDLRDCGLIVTTLATSSCLTSLNISFTHIVIDEAAQALECEVLIPLVLATP
HTRLVLAGDHMQLAPEIYSDLASERGLGISLLERIYGMYPKTHPCRIHLHQNYRAHEDII
KFTSEMFYDGIVMSPPTINKIDIIEHPTLKPLTFYAVQGAEEQGIHSTGYANMDEVYELV
NRVQELRSNWPTDRWGIYGEKSIGVLVYYAEQVQRIRTELRERGMMDVSVERVLNVQGKQ
FTAVFISTVRTRRCCRYSAERKVKDYGFLTNPRLLNTAMTRAKCLVAVVGDPIALFTIGS
CRRLWQRYLELADLRGIDRETLRYRLSQIPELPLITPLNPLAREFTPRNNFYLVEYVPVP
MLYPVFHYPYYSA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcactcatatcgaatgaacgaagaggttaaaaccgactttccttccggcttc
gccgagaaggtgcactacgactgggtgaaatcgaagaatcctgagacgataataacgtcc
agggatacgaacaatgtgttaattttttcgaataagagtctctgctgtcgttcgaccatt
aacgatgtaacgtactgttgggactttcagatcgtgacgaacggtaaacagttacaaaga
atagcactaaccttggatgagaatcgcagcaattttgtattgaaatctgttatatgtgat
aatattaatattggaattacaaatggccaggaatggtacaatccagagttgaacaattca
aacgcaaacgaaaatgcactaagtggtgaagagcattatgtagtcaaaatttgctttatt
gcccataaatatggcacgtatcgccagaatgtcattttttactttggggagtacccagtg
ataatccaaaagatttgcatggattcggtaccaaccggagacttaaccaggattgacgaa
gcaaccaattatcaattctcacagaatccaatgatgtggaataatgaaacgtaccagatt
tgctggtttaattcaccttttgtatcaatgaaagacccaaaggaggacacactgtgcatg
acgtatccatatccaaatagaaacaactttttcttgactcaagaatctctcacggacgat
tgtttaactccagaaaattatagaggtcgtcttcacgagttaatcacggtggaagagcta
gctcgacatgaacagatagctagatataatgaaacctcctacatgcgtcttcatagctac
tacattttgtctgcaggtgatggatccaccattgccaaatatgcaccaccgggtgaactc
tttgctcagctgccgctaagccgcagtatctcagaagatacgaaaagcggcaggctgttc
ctgagaggttgcaataaagtactcttgaagagcttaacacaaccgtcgaatgtaatatac
gaagcgtacatagaggataagtgcacgcaaacagtgtacattagattgtcgaaagagtgt
gtgtacgcgttaaacttggtagccaatatggatgtacacgtgcaagttcaattcctattg
aaccggttgcccttctgcgagtggcacaagagcgtggatagtttgcctgacattggccta
gtatttctaaacacagtttacagaaatatggaagaagatagtcctctaaatttgttaaaa
agaagctcgagcaatatgggatatagcttgttgaacgtagaacaggaacacgcattggcg
gtaataacagcctctactaatatctccatgccaccgatcttgctactaggaccatttgga
actgggaaaacgtttaccattgctcaggcactacgaattttgctgataggtagctcagaa
tataaaatcctgctctgcacacacagcaacagcgcggcagatctttatgttaaagaattt
ttcgacacttggtataaatgtgataaaaatccacgattgaaaccagtaagaatctattac
aaaggtagatccaggaacacggtacatccagtggttcagcagtacagtttgatgaaagat
aacggtaccttccgcgaaccgaccgaagaagaccttagagactgtggtttgatcgtgacc
actttggccacgtctagctgtctaacaagcttaaatatatcgttcacgcatatagtgatc
gacgaggctgctcaagcattagagtgcgaagtccttatacctttagtcttagctacccca
cacactcgcttagttctggccggcgatcacatgcaacttgcgccagaaatatatagtgac
ctggctagcgaacggggtctgggtataagtttactggaaaggatctatggaatgtaccca
aaaactcatccatgcaggattcatctgcatcagaattatcgtgctcatgaggacatcatt
aaatttacttcggagatgttctacgacggaattgtcatgtctccacccacaataaacaag
atagacataatagagcaccccacgttaaagcctttgaccttttatgctgttcaaggcgcc
gaagagcagggcatccattcgacaggctacgcgaacatggacgaggtatacgagctggtt
aaccgcgtgcaggagctgcgtagcaattggccaacggatcgttggggtatctatggtgaa
aagtcaatcggtgtgctcgtctattacgcggagcaggtgcagaggattcgtacggaactg
agggaacgcgggatgatggacgtgtcggtggagagggtgttaaacgttcaggggaagcaa
ttcaccgccgtgtttattagcacggtgcgtaccaggcgctgctgtcgatactccgcggag
aggaaggtgaaggactatggcttcctgaccaatcccagacttctgaacactgctatgaca
cgggctaaatgtctggtagcagtggtgggcgatcctattgctctgttcaccattggttcc
tgcaggaggctctggcagagatacctggagctagctgatttacgcggcatcgacagggaa
actctgaggtatcgtttgagtcagatacccgagcttccgctgattacaccgctgaaccca
ttagcgagggagtttacacccagaaataacttttatctggtggagtatgtgccggttcca
atgttgtatccggtgtttcattatccttattactctgcgtaa
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