Bombus pascuorum (common carder bee): 132916349
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Entry
132916349 CDS
T09597
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132916349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpas03041
]
132916349
Spliceosome [BR:
bpas03041
]
Complex A
Other components
Complex A specific factors
132916349
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
132916349
NCBI-ProteinID:
XP_060832249
LinkDB
All DBs
Position
1:complement(8000613..8006962)
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AA seq
615 aa
AA seq
DB search
MNQSRNFTSLLNPSYLQNAQQNAATANAAAAAAAAAAAVSAAIANGTQLNSNSNSTTNNT
RKREAEGDVKQEKETKEERRKRRKTRWSGSEHDKTFIPGMPTVLPTNLTPEQEKAYLFQL
QIEEISRKLRTGDLGIPLNPEERSPSPEPIYSSDGKRLNTREYRTRRKLEEERHNLIQKI
LKINPEFKPPPDYKPPIIRVHDKVMIPQEEHPDINFVGLLIGPRGNTLKSMEKETGAKII
IRGKGSVKEGKVGRKDGQPLPGEDEPLHAYITANNLDAVKKAVERIHEIIRQGVEVPEGQ
NDLRRNQLRELALLNGTLRENDGPRCTNCGASDHKSWLCPDKPNVTNNIVCSSCGGAGHI
ARDCRSKRPGQGGPAAAGMGGMGPGGDKAKIDEEYMSLMAELGEGPPPDRSKTGQPRQPN
PNPNYPGLFDRQQAPRALMAAPAHPPPQMMQGGPMMPPPGMAPPPWSQGEVNNMNGMNMQ
WQPPVSMPPPPGVMQPPPPPPGSTSQPNIPPLMPWMAGNNQPPPPGQMPPTQIPPPGMGI
PPWQQGQQGPMRPPPPGTAPPPGFPGWQPQQMGGWPPAAPVPPPPQQQTPAPPGIDLNTL
PTLLAQPPPPPPPTS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtcacgaaatttcacatcattattgaatccaagttatttgcaaaacgcccaa
caaaatgctgcgactgcgaatgcggctgctgctgcggctgcagcagctgccgcggtgagt
gccgcgattgctaatggaacgcagttgaactccaattctaattccacgacaaataacacg
agaaaacgtgaagcagaaggtgatgttaaacaggaaaaagagacgaaagaggaacgtagg
aagaggaggaaaactagatggagcggtagtgaacatgacaaaacttttataccaggcatg
cctacggttctaccaacaaacctgactcctgaacaggagaaggcttacctctttcagctg
cagattgaggaaatcagcaggaagctacgcactggagaccttggaattccacttaaccca
gaggaaagatctccttctccagaacccatatatagtagtgatggtaaacggttgaataca
agagaatatcgtactagacgtaaattggaggaggaacgtcacaatcttattcagaagatt
ctcaaaattaatccagaatttaaaccaccgccagattataaaccaccaataatacgagtg
catgataaagtaatgattcctcaagaggaacatccagatattaactttgttggccttttg
attggaccacgtggaaatacattgaaatcaatggagaaggaaactggagcaaagataata
attcgtggtaaaggttctgtaaaagaaggaaaagttggaaggaaagatggacaaccttta
cctggtgaagatgaaccattgcatgcatacattactgctaataatttagatgccgtaaag
aaggctgttgaaagaattcatgaaattatacgtcaaggtgtggaagtacctgaggggcaa
aatgatttacgacgtaatcaacttagagaattggctttattgaatggaacattgcgtgaa
aatgatggaccacgttgtactaattgtggtgcatctgatcataaatcatggctgtgtcca
gataaacccaacgtaacaaataatatagtatgttcgagttgcggtggagcaggtcacatt
gcacgtgactgtagatctaagagacccggtcagggtggaccagctgctgcgggtatgggt
ggaatgggaccgggtggagataaagctaaaatagacgaggaatatatgtctcttatggca
gaattgggtgaaggtccaccacctgatcgatctaaaaccggacagcctcgtcaaccaaat
ccaaatcccaattatcctggtctctttgatagacaacaagcacctcgtgctttaatggct
gcaccagcacatccaccgccacaaatgatgcaaggtggtccaatgatgcctccaccagga
atggctccgccaccttggagtcaaggagaagtgaataacatgaatggtatgaacatgcaa
tggcaacctcctgttagtatgcctccaccacctggcgtgatgcaaccacctccaccaccg
cctggttctacatctcaaccaaatatcccaccattgatgccttggatggctggaaacaat
caaccaccaccaccagggcaaatgccaccgacgcaaattccaccacctggaatgggtata
ccaccatggcagcaaggacaacaggggccaatgcgcccacctccacctggaactgctccc
cctccaggttttccaggatggcaaccgcaacagatgggtggatggccaccagcagctcca
gttcctcctccacctcaacaacaaacaccagctccccctggcattgatctcaacacttta
cctacgttattggcacaaccacctcctccacctccaccaactagttag
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