Bombus pascuorum (common carder bee): 132916719
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Entry
132916719 CDS
T09597
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03018
RNA degradation
bpas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132916719
09123 Folding, sorting and degradation
03018 RNA degradation
132916719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132916719
03041 Spliceosome [BR:
bpas03041
]
132916719
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132916719
mRNA degradation factors
5'-3' decay
Lsm complex
132916719
Spliceosome [BR:
bpas03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132916719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
132916719
NCBI-ProteinID:
XP_060832981
EnsemblRapid:
ENSBPAG00000007278
LinkDB
All DBs
Position
2:17337853..17338558
Genome browser
AA seq
91 aa
AA seq
DB search
MTSSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTESEAT
PEGRRVTKLDQILLNGSNITMLVPGGEMPDT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacgagttctgtcagtacaaatccatcaacattattgcctttagaattagttgacaaa
tgtatcggttctcggatacatattattatgaaaaacgataaagaaattgtcggcaccttg
ttaggttttgatgattttgtaaatatgctgctcgaagacgtgacagaaagcgaagcaaca
cccgagggacgaagagtcaccaaacttgatcaaatactgcttaacggaagcaatatcaca
atgcttgtacctggtggagaaatgcctgacacgtaa
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