Bacillus paramycoides: AAG068_21710
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Entry
AAG068_21710 CDS
T11974
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bpay Bacillus paramycoides
Pathway
bpay03030
DNA replication
bpay03430
Mismatch repair
bpay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAG068_21710 (holA)
03430 Mismatch repair
AAG068_21710 (holA)
03440 Homologous recombination
AAG068_21710 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins
AAG068_21710 (holA)
03400 DNA repair and recombination proteins
AAG068_21710 (holA)
Enzymes [BR:
bpay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAG068_21710 (holA)
DNA replication proteins [BR:
bpay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAG068_21710 (holA)
DNA repair and recombination proteins [BR:
bpay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAG068_21710 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
SH3_Tf2-1
Motif
Other DBs
NCBI-ProteinID:
XAH86320
LinkDB
All DBs
Position
complement(4195086..4196096)
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AA seq
336 aa
AA seq
DB search
MSDIHKKIKKKQFAPLYLLYGTEAFFINETIKLITTEALEEEDREFNVVTYDLEEAYLED
VVEDARTLPFFGERKVLLIKSPLFLTSQKEKLEQNIKILEEYIGEPSPFSILVFVAPYEK
LDERKKITKLLKKTADVIEANAMQVQDVQKWIVARADEVHVHIDHAAVSLLLELVGSNVT
MLAKEMDKLTLYVGMGGEITPKLVAELVPKSVEQNVFALTEKVVKKDIAGAMQILDGLFT
QQEEPIKLLALLVSQFRLLHQVKELQQRGYGQNQIASHIGVHPYRVKLAMNQTKFFSFEE
LKKVIIELAEADYSMKTGKMDKKLVLEFFLMRLNHM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatacataaaaaaattaaaaagaagcagtttgctccgttgtatttactgtat
ggaacggaagcgttttttataaatgaaacgataaagcttattacaacagaagcgcttgaa
gaggaagatcgcgagtttaatgtcgtgacatatgatttagaagaagcgtatttagaagat
gtggttgaggatgcacgtacacttccttttttcggagagcgtaaagtactattaataaaa
tcaccactatttttaacttcacaaaaagaaaagttagaacaaaatataaaaattttagaa
gaatatattggggagccttctccgttttctattcttgtttttgttgcgccttacgaaaag
cttgatgaacgaaaaaaaattacaaaactattaaagaaaacagcggatgtaatagaagcg
aacgcaatgcaagtgcaagatgttcagaagtggattgttgctcgtgcagatgaagtgcat
gtacatattgatcatgcagctgttagtttgttgttagagcttgtaggaagcaatgtaacg
atgttggcgaaggaaatggacaagttaacgttatatgtcggtatgggcggagagattaca
ccgaaactcgttgcagagcttgtgccaaaatcagttgaacaaaatgtgtttgctttgaca
gaaaaagtggtgaaaaaggatatcgcgggtgcgatgcaaattttggatggattatttacg
cagcaggaggaacctattaaattacttgcattattagtaagtcaattccgtttgttgcat
caagtgaaagagttacagcagcgtggttatgggcagaatcaaattgcgtctcatattggt
gtgcatccatatcgtgtaaagttagcgatgaatcaaacgaagtttttctcttttgaagaa
ttaaaaaaagtaattatagaattagcggaagctgattatagtatgaaaacgggaaaaatg
gataagaaacttgtacttgagtttttcttaatgcggttaaatcatatgtga
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