Butyrivibrio proteoclasticus: bpr_I0734
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Entry
bpr_I0734 CDS
T01292
Symbol
addB
Name
(GenBank) ATP-dependent nuclease subunit B AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bpb
Butyrivibrio proteoclasticus
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_I0734 (addB)
Enzymes [BR:
bpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bpr_I0734 (addB)
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
bpr_I0734 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
CBP66
Motif
Other DBs
NCBI-ProteinID:
ADL33477
UniProt:
E0S102
LinkDB
All DBs
Position
1:885935..889474
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AA seq
1179 aa
AA seq
DB search
MLRFCFGASGAGKSTTVYQEIIDRSFTEKDKDFLIIVPDQFTMQTQKDVVRMHPSHTIMN
IDVLSFGRLSHRIFEEVGLSSFSVLDDVGKSLILRRVADILGDKLPVIGPNMHKPGYIDE
VKSTISEFMQYGITDDQLALLEEKSGKRGALHSKLGDLRLLYSEFHEYISNKYITTEETL
DILCKSVSKSKLISNSVIIFDGFTGFTPIQYRVIKQLLKSATEVIVTVTIDAGEDVYANS
YEEQELFMLSKKTIRDLEKLEYELSQEEMKSVGTLPDFATWRNMRDRSGDIRINSSPVRR
LQDNKALSFLEENLFRYNAKKYEGVPQELEIFEASTPEAEVRQTMLKITDAVRSGKYAYR
DIAIVCGSLDEYSELIAQTAGRFGIPVYIDQNTSLMLNPFIEYLTSAIGIAISGYKYEDV
FHYMRSGMTAFSREDTDILDNYVRALGIRGKSQWDDRFARRMPKKFMSGNKKTDDMTERE
LSIMEKLENMRVTITDELSPLFRVQKATAKEISDAILEVIDRNNSKARLDEYRDFFIQKG
NLRKAKEFEQIYDKVIALLTQIGELIGTDVLTLQEYRDILSVGFGDIEVGTIPQDVDRII
VGDMERTRLKEIKILFFLGTVDGAIPSNAGTGGIISDVDRQFLVDLGTGVELAPTPRQQM
YIQRLYLYMNLTKPTDKLYLSYAELDGEGKSRRPAYLVPKLKQMFPELIVQRPEDGSFDS
QNAAYMDSLMNAAELIRKYAIDVISDEEKSSLYALLKVLGENENTKSTLEKIEAAAFRHY
ENKPLAKMLALSLYGASLENSVSRLETFASCCYAHFIKYGLQLEERQEYDFDTSDLGNVF
HEVLEKYTSEIMTRKIDWRELSDEESEQILGRALTECVDRYGDTILRSTSRNQHMIDRIH
RILTRTVGILKYQISKGVFNPAFLEMDFREAGNLDEINITLSEDEKTRIIEKMRLRGRID
RVDLCEDDDHIYVKVMDFKSGKKKFNLAFLYHGLQLQLVMYMNVAAAVEKKISGGKEVVP
AALLYYHVDDPMADGKGDMQPEDINEAIKKELRTTGLVSDNDEVIQRLDEGLSGKSDVIP
VEYNKDGSFSVYSQVISSDDYSAVSGYVNKKIREFGTRILNGDIKVDPYEGGGRNSCTYC
QYKTICGYDEKIPGYATRQLDMDENKAMEAIRLSSQAND
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgttaaggttttgttttggggcatctggtgcaggtaagagcaccacagtttatcaggag
atcattgacagaagctttacggaaaaagataaagactttctgatcatagttcctgatcag
tttacaatgcagacacagaaggatgtagtcagaatgcacccttcgcatacaataatgaac
atcgacgtactgagctttggccgactttctcacagaatatttgaggaagtaggtcttagc
tctttttctgtgcttgatgatgtgggaaagagccttatcctgaggcgagttgcggatatt
ctcggggataagcttccggtgataggccccaacatgcacaagcccggatatatagatgag
gtcaagtccacaatttctgagttcatgcagtatggaatcactgatgatcagcttgctctt
ttggaggaaaagagcgggaaaagaggggctctccacagtaagctcggagatttaaggctc
ctctactcagagttccatgagtatatttccaataaatacataacaacagaagagacactt
gatattttatgtaaatcagtttcaaagtccaaacttatcagtaacagcgttattattttt
gacggctttaccggatttacacctattcagtacagagtgatcaagcagctccttaaatcc
gccacagaagttattgtcactgtgacaattgatgccggggaggatgtatacgcaaatagc
tatgaggagcaggaactcttcatgctcagtaaaaagacaatccgtgatcttgaaaagctc
gaatatgagctttcacaggaagaaatgaagagtgttggaacacttcctgattttgctaca
tggcgaaatatgagagatagaagcggtgatatcaggataaacagctcacctgtcagaaga
cttcaggataacaaggctctttcttttctggaggaaaatctctttagatataatgccaaa
aagtatgagggggttcctcaggagcttgagattttcgaagcttcaacgcctgaagctgaa
gtgcgtcagactatgctcaagataactgatgcggtaagatcaggcaaatacgcctacaga
gatatagcaattgtctgcggctcacttgatgaatacagcgagctgatagcgcagactgcg
ggaagattcgggattcccgtgtatattgaccagaatacgagccttatgctcaacccattt
attgagtatttgacgagcgccattggaatagcaatttcagggtataaatatgaagatgtt
ttccactatatgagaagtggaatgaccgctttttcaagagaagacacagatattcttgat
aactacgtgagagcacttggaatcaggggcaaaagccagtgggatgacagatttgcaagg
cgtatgccaaagaaattcatgtcgggcaataagaaaacagatgacatgacagagcgcgag
ctatctattatggagaaacttgagaacatgagggtgactataacagatgagctgtcacct
cttttcagggtccagaaagctactgccaaagagatatctgatgcgattcttgaggttata
gatcgaaataacagtaaggccagacttgatgaatatagggacttctttatccaaaaagga
aatcttagaaaagccaaggagtttgaacagatttatgataaagtcatagctcttttgaca
cagattggagaacttatcggcacagatgtgctcactcttcaggagtacagagatattctc
agtgttggctttggcgacatcgaggttggcactattccacaggatgttgacaggatcatt
gtgggagatatggagagaacaaggctcaaggagataaagatactattcttccttggaaca
gttgacggggctataccttcaaatgcaggcactggcggtatcatctctgatgttgacaga
cagtttctggttgaccttggtacaggtgttgagcttgcaccgacgccgaggcagcagatg
tatatccagaggctctatctgtacatgaacctgactaagcccacagataagctctatttg
tcctatgcagagcttgatggagaaggcaagtccagaagacctgcttatcttgtacccaag
ctaaagcagatgtttcctgagcttatagtacagcgccctgaggatggcagctttgacagc
cagaatgcagcttatatggacagtcttatgaatgctgctgagcttatcaggaaatatgca
attgatgttataagcgatgaggaaaagagtagtctatatgcccttttaaaggtacttgga
gaaaacgagaatacaaaatctactcttgaaaaaatagaagctgcggcctttagacactat
gagaataagccacttgccaagatgcttgcgctgtcactctatggtgcaagccttgagaac
agtgtttcaaggcttgagacatttgcttcctgttgctatgcacactttatcaaatatggt
cttcagctcgaggagcgtcaggaatatgatttcgacacatctgacctgggtaatgttttc
catgaagtattagagaagtacacctccgaaataatgaccaggaagattgactggagagag
ctatccgatgaggagtcagagcagattttgggaagagcgcttacggagtgtgttgaccgc
tatggagatactattcttcgcagcacttcccgtaaccagcacatgattgacaggattcac
aggattttgacgaggacagttggaattctcaagtaccagatcagcaagggagtctttaat
cctgctttccttgagatggactttagagaagccggcaatcttgatgagataaatataact
ctttctgaggatgaaaagacccgaatcatcgagaagatgagacttcgcggaagaattgac
agagttgatctgtgcgaggacgatgaccatatttatgtcaaggtaatggattttaagtca
gggaaaaagaaattcaatctggcttttctgtaccatggactgcagctgcagcttgtgatg
tatatgaatgtggcagcggctgtggaaaagaaaatatccggcggcaaagaggttgttcct
gcggcgcttctctactaccatgtggatgatcctatggctgatggaaagggagatatgcag
cctgaggatattaatgaggctatcaaaaaagagctcagaacgacgggacttgtaagcgat
aatgatgaagtaatacaaagactcgatgaaggtcttagcggaaagtctgatgtcatcccg
gttgagtacaataaggacggaagcttttctgtctactcacaggttatttcaagtgatgat
tacagcgcagtttcaggctacgtgaacaagaagataagggagtttggcacaagaatcctt
aacggagatatcaaagttgatccttatgaaggcggtggccgaaattcctgcacctattgt
cagtacaagactatctgcggatatgacgagaagatcccgggatatgctacaaggcagctt
gatatggacgaaaataaggcaatggaagcaataaggcttagtagtcaggccaatgattga
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integrated database retrieval system
