Butyrivibrio proteoclasticus: bpr_I0960
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Entry
bpr_I0960 CDS
T01292
Symbol
polC1
Name
(GenBank) DNA polymerase III C PolC1
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03030
DNA replication
bpb03430
Mismatch repair
bpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
bpr_I0960 (polC1)
03430 Mismatch repair
bpr_I0960 (polC1)
03440 Homologous recombination
bpr_I0960 (polC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpb03032
]
bpr_I0960 (polC1)
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_I0960 (polC1)
Enzymes [BR:
bpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
bpr_I0960 (polC1)
DNA replication proteins [BR:
bpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
bpr_I0960 (polC1)
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
bpr_I0960 (polC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
DEDDh_C
RNase_H_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADL33702
UniProt:
E0S1M7
LinkDB
All DBs
Position
1:1178121..1182710
Genome browser
AA seq
1529 aa
AA seq
DB search
MSKSFFDVFPALKLDAGTKEIMEQTMVEKVSTTRKQDFIRIYISSNKLIDKSDILKTESG
IKKQLFGNQDLTVKIYEKFSLSAQYTPENLIDLYRESIEMELKDYDHMEYSLFRSAQFVY
PDDDNIVVQLEDSVVGKKKAPDLVRVLSKIINERCGLTAAISPEFVKIEKEEAEPDYTEE
ATILAKKLEAVEQEAIEKKKEREEKKAAKEAEKNGGKSFAEGNAQGAKSQEKTQAGTTAE
GAKSSFAGKGKWSGRRSDFGGGFKKSDNPDVIFGRDFDDEVMKLVDLVGELGEVTIHGQI
TAFEQRDIRNEKSILIYDITDFTDSITVKMFIKTEDAPEVTKDIKKGAFVKVKGIAAVDK
FDHELSIQSVVGVKKIPDFTTKRKDNAEVKRVELHCHTKMSDMDGVSEVKDIVKQAYKWG
MPGIAITDHGVVQALTDANHVWEDLYSGENKRRKEAGEPPIERQDFFKLVLGVEAYLVDD
LKEIVVNDKGQPLDDTTFVVFDIETTGFSPIKNRIIEIGAVKIRNGEILERFSEFINPQV
PIPYRIEKLTSITDEMVMDAPTREVIIPKFVEFCKDAVLVGHNVAFDISFINQNCQDLGI
DVDYTTVDTLWLARYFFPLQAKHTLDAVAKTLNVVLDHHHRAVDDAECTALIFNKFIPML
KEQKAENLTDVNILGKPTPEMIRHLRPNHCIILAKNTLGRVNLYTLVSKSHIDYFRRFPL
IPKSELLKYREGLIIGSACCAGELYGAVVEGRPPEEIAGLVNFYDYLEIQPVGNNHFMVD
SDRYEDINSDDDIREINKEIVRLGEQFNKPVVATCDAHFLNPEDEIYRTIIMAGKGMNDE
EPAPLFLRTTEEMMAEFDYLGGDKAKEIVIDNTRKILDMCDSISPVRPDKCPPVIENSDE
ILTKICYDKAHEIYGEELPEIVQERLERELNSIIKNGFAVMYIIAQKLVWKSNEDGYLVG
SRGSVGSSFVAFTSGITEVNSLSPHYVCPKCKYSDFDSPEVLAFGGNSGCDMPDKRCPKC
GTMMYKDGFDIPFETFLGFKGDKEPDIDLNFSGEYQSKAHKYTEVIFGYGQTFRAGTIAS
LADKTAFGFVKKYYDGIGASKRKSEINRIVQGCTGIRRGTGQHPGGIIVLPVGENINSFC
PVQHPANDMTTATITTHYDYHSIDHNLLKLDILGHDDPTMIRFLQDCTGLDPKLVPLDDK
NVMSLFMNTTALNVTPEQLGGTKLGCLGLPEFGTDFAMQMVIDAGPSSLSHLIRISGLSH
GTDVWLGNAQTLIQEGTATIDTCICCRDDIMIYLIQKGLDKSESFKIMEAVRKGKVAGGK
EKNWPEWKKDMIEHGVPDWYIWSCEKIKYMFPKAHAAAYVMMAWRIAYFKVYIPQAFYAA
WFSIRAKAFNYEHMCLGENHLHAIMREYQNKKDELTNAQQAEYGDMRLVEEMYERGIEFM
PIDIFKVKSRDFQVIGDKIMPALTSIDGMGEKAADQIVEAAKDGPFLSKDDFRQRTKCPQ
GVIEKMADMGLLGDIPDSNQISLFDLMKF
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagagtttttttgatgtttttcctgcgcttaagctggatgcggggaccaaagag
atcatggaacagaccatggttgaaaaggtatccaccacgaggaagcaggattttattaga
atatatatttccagtaacaaactgatagataaatctgacattctcaagactgaatccgga
atcaagaagcagctctttggaaatcaggatctaacggtcaagatttacgagaagtttagc
ttgtcagcgcagtatactcctgagaacctgattgatttgtacagagagagtatagagatg
gaactgaaagactatgaccatatggaatatagtctttttcgttctgcccagtttgtgtat
cctgatgatgataatattgtagttcagcttgaagatagcgtagttggcaagaagaaagct
ccagatctggtgagagttttatccaagatcattaatgagagatgtggccttacagccgct
atttctcctgagtttgtcaagattgaaaaagaggaagctgaacctgactatacagaagaa
gctacgatacttgctaaaaagcttgaggctgttgaacaggaagctattgagaagaaaaaa
gaaagagaagaaaagaaggccgctaaagaagctgagaaaaatggcggaaagtcttttgct
gaaggaaatgcccagggagctaagagccaggagaagactcaggcaggaactactgcggag
ggtgccaagagctcttttgctggaaaaggaaaatggagcggcagaaggtcagactttgga
ggcggattcaagaagtcagataatcctgatgttatttttggaagagattttgatgatgaa
gtaatgaagctggttgatcttgtgggagaacttggcgaagttactattcatggccagata
acagcttttgagcagagagatatcagaaatgagaagagtatcctcatttacgatattact
gattttacagattctattacagttaagatgttcattaagactgaggatgcgcctgaagtt
accaaggatatcaagaagggagcttttgttaaggtcaagggtattgctgcagttgataag
tttgaccacgagctgtcgattcagtctgttgtaggagtcaagaagattccggattttaca
accaagcgtaaggacaatgctgaggttaagcgtgtagagcttcattgccataccaagatg
agcgacatggatggtgtttccgaggtcaaagatatagttaaacaggcctataagtgggga
atgccgggaattgccattacggaccatggcgttgttcaggctcttactgatgccaaccat
gtgtgggaggatctgtattccggagagaataagagaagaaaagaagccggtgagccaccg
atagagaggcaggatttctttaaacttgttcttggtgttgaggcgtatcttgttgatgat
ctcaaggagattgttgttaatgacaagggacagccacttgatgacactacatttgtagta
tttgatatagagacaacaggtttttcacctattaagaacagaattatagagattggtgct
gttaagatcagaaatggcgagatattagagagattttcagaatttatcaaccctcaggtt
cctattccatacaggattgagaagcttaccagcattactgatgaaatggtaatggatgcg
cctacaagggaagttattatccctaagtttgttgagttctgcaaagatgctgttcttgta
ggacataacgttgcttttgatataagctttataaatcagaactgtcaggaccttggaata
gatgttgattatacgacagttgataccctgtggcttgcgagatattttttcccgcttcag
gccaagcatactctggatgcagttgccaagactcttaatgtagtgcttgatcaccatcac
agagctgtcgatgatgcagagtgtacagcccttatctttaacaagtttattcctatgctc
aaggaacagaaggctgagaatctgacagatgttaatattctgggtaagcctacacctgag
atgataaggcaccttcgccccaatcactgtatcattcttgccaagaatactttgggaagg
gttaatctttatacccttgtcagcaagtcacatatagattacttcagaagattcccgctt
attcctaagagtgaacttttgaagtatagagagggactcataataggaagcgcatgctgt
gcaggagagttgtatggagcagttgtagagggaagaccacctgaggagatagctggcctt
gtaaacttctatgattatctggaaatccagcctgtaggtaataaccactttatggttgat
tccgatagatatgaggatattaattctgatgatgatatcagagagatcaataaagaaata
gtaaggcttggagagcagttcaacaagcctgttgttgccacctgtgatgctcatttcctc
aatcccgaggatgagatatacagaaccatcatcatggccggaaaaggtatgaatgatgag
gagcctgcacctcttttcctcagaaccacagaggagatgatggcagagtttgactatctt
ggcggtgacaaggccaaagagattgtaattgataacaccagaaaaattctggatatgtgc
gatagtatttctcctgttcgtccggataagtgtccgcctgtaattgagaatagtgatgaa
atactgaccaagatctgttatgacaaggctcatgaaatatacggtgaagaactacctgag
atagttcaggagcgacttgagagagagcttaactctattatcaagaatggattcgccgtt
atgtatattattgcccagaagcttgtttggaaatccaatgaggacggatatctggtaggt
tcgagaggttctgttggatcttctttcgttgcgtttacgtcaggtatcacagaggttaac
tctcttagtcctcattacgtgtgccctaagtgcaagtacagcgattttgattcaccggaa
gtccttgcatttggcggtaattcgggctgcgatatgcctgacaagagatgtcctaagtgc
ggaacaatgatgtacaaggacggctttgatattcctttcgagacattccttggattcaag
ggtgacaaggagcctgatatcgaccttaacttctctggagagtatcagtccaaggctcat
aagtatacagaggttatcttcggctatggacagaccttcagagccggaactatcgcttcg
cttgctgataagacagcatttggatttgtcaaaaagtactatgacggtataggagcaagt
aaaagaaaaagcgagataaacagaattgttcagggatgtaccggaatcagacgtggtaca
ggccagcatccgggaggaatcatagttcttcctgtgggagagaatattaattccttctgt
cctgttcagcatcctgccaatgacatgacaacggcaacaattactacacattacgattat
cactcaatcgaccataacctgctcaagctcgatatcctgggacacgatgatcctacaatg
atcagattccttcaggactgcactggacttgatcctaagcttgttcctttggatgacaag
aacgtaatgagtctttttatgaatacaacggctcttaatgttactcctgaacagctgggt
ggaaccaagcttggatgccttggacttcctgagtttggtactgactttgctatgcagatg
gttatcgatgcaggaccttcatctttatcgcaccttatcagaatttcaggtctgtctcat
ggtacggacgtttggcttggcaatgcacagactttgatccaggaaggaactgcaactatc
gatacctgtatctgctgtcgagacgatataatgatctacctgattcagaagggacttgat
aagtcagagtccttcaagatcatggaggctgttcgaaagggtaaggttgccggaggcaaa
gagaagaactggcctgaatggaaaaaagatatgatcgagcatggcgttccggactggtac
atatggtcctgcgagaagatcaagtacatgttccctaaggcccatgcggcagcttacgtt
atgatggcatggcgtattgcttactttaaggtgtatattcctcaggctttttatgctgcg
tggtttagtatcagggccaaggcctttaactatgagcatatgtgccttggagaaaatcat
cttcatgcgatcatgcgtgaatatcagaataaaaaggatgagcttacaaatgctcagcag
gctgaatatggagatatgagacttgttgaggaaatgtatgaacgaggcattgaattcatg
cctatagacattttcaaggttaagtccagagatttccaggttatcggagataagatcatg
cctgcccttaccagcatagacggtatgggtgagaaggctgctgaccagatagtagaagca
gccaaggacggtccgtttttgtccaaggatgatttcaggcagagaacaaagtgcccacag
ggtgttattgagaaaatggcagatatgggacttttgggagatatacctgattccaaccag
atcagcttgtttgatcttatgaagttctga
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integrated database retrieval system
