Butyrivibrio proteoclasticus: bpr_I1723
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Entry
bpr_I1723 CDS
T01292
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bpr_I1723 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpb03021
]
bpr_I1723 (rho)
03019 Messenger RNA biogenesis [BR:
bpb03019
]
bpr_I1723 (rho)
Transcription machinery [BR:
bpb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
bpr_I1723 (rho)
Messenger RNA biogenesis [BR:
bpb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
bpr_I1723 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
Spore_III_AA
ATPase_2
OB_RNB
AAA_14
NACHT
SAP
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADL34460
UniProt:
E0RXN3
LinkDB
All DBs
Position
1:complement(2121601..2123088)
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AA seq
495 aa
AA seq
DB search
MRERYETLKLNDLREIAKKRGIKGATALKKSEIIDIMCELDEKENAQKKEQVKEAEKEPE
KATEKEERPKSAPRKKNIVVTGGNAKPAPRTPAGNAEEKKPVRPEKAEKTSEAPQENEEV
ADGDDANGILEVMQDGYGFIRCENYLPGENDVYVAPSLIRKFNLKTGDILKGKCRAKKET
DKFAALLVLDSVNGYKPEVAMGRWNFENMTPIFPNSRIKLEQPGSSVAMRIMDLISPIGK
GQRGMIVSPPKAGKTTLLKEVAKSILKNDSNIHLIILLIDERPEEVTDIKESIEGPNAEV
IYSTFDELPEHHKRVAEMVMERAKRLVEHGKDVAILLDSITRLTRAYNIVVPPSGRTLSG
GLDPAALHMPKKFFGAARNMREGGSLTILATALIETGSKMDDVIYEEFKGTGNMEMVLDR
KLQEKRIFPAINIPKSSTRREDLLLSNEELAAINSLRKGFNGMKADDAVDQCINLFSKTR
NNNEFVRMVEKQVRY
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgagagaacgttatgaaacacttaaattaaatgaccttagggaaattgccaagaaaaga
ggcataaagggtgctacagcacttaagaagtcagagatcattgatattatgtgcgaactt
gacgaaaaagaaaacgcacagaaaaaggaacaggtgaaggaagcagagaaagagcctgag
aaggcaactgagaaagaagagcgtcctaagtctgctcccagaaagaaaaatatagtagtt
acaggtggaaatgctaagcctgcgccaagaacacctgcaggaaatgcagaggagaagaaa
cctgtaagacctgagaaggcagagaaaacttctgaagcacctcaggagaatgaagaggta
gctgatggcgacgatgcaaatggcattcttgaagtaatgcaggatggctatggctttatc
agatgcgagaattatctccccggtgagaatgacgtatatgttgcaccaagccttatcaga
aaattcaacctcaagaccggagatattcttaagggaaaatgcagagccaagaaagaaaca
gataaattcgcagctcttttagttcttgattcagtaaacggatacaagccggaagttgct
atgggcagatggaattttgaaaacatgacacctattttcccaaattccagaattaagctt
gagcagcccggttcatcagttgctatgagaatcatggatcttatcagccctattggtaag
ggacagagaggtatgatcgtatctcctcctaaggccggtaagacaacacttctcaaagag
gttgccaagtcaatcctcaagaatgacagcaatattcacctcattatccttcttattgat
gagagacctgaggaagttacagatatcaaggagtcaatcgagggaccaaacgcagaagtt
atttattcaactttcgatgagcttcctgagcaccataagagagtagcagagatggttatg
gagcgtgcaaagagacttgtagagcatggtaaggatgtagcaatcctccttgattccatc
acaagacttacacgtgcatataacattgtagttcctccttcaggaagaacactttcaggt
ggtcttgatcctgcagctcttcatatgcccaagaaattctttggtgcagctcgtaacatg
agagagggcggaagtcttacaattcttgcaactgctcttattgagacaggttccaagatg
gatgacgtaatttacgaggagttcaagggaacaggtaacatggaaatggttcttgacaga
aagcttcaggaaaagagaatcttccctgctatcaatattcctaagtccagcacgagaaga
gaagaccttcttctttctaatgaagaactcgctgctatcaatagccttcgtaaaggcttc
aatggcatgaaggctgacgatgctgttgatcagtgtatcaatctcttctccaagacaaga
aacaacaatgagtttgtcagaatggttgagaaacaggttcgctattga
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