Butyrivibrio proteoclasticus: bpr_I1801
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Entry
bpr_I1801 CDS
T01292
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit HolA
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03030
DNA replication
bpb03430
Mismatch repair
bpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
bpr_I1801 (holA)
03430 Mismatch repair
bpr_I1801 (holA)
03440 Homologous recombination
bpr_I1801 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpb03032
]
bpr_I1801 (holA)
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_I1801 (holA)
Enzymes [BR:
bpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
bpr_I1801 (holA)
DNA replication proteins [BR:
bpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
bpr_I1801 (holA)
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
bpr_I1801 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
ADL34537
UniProt:
E0RVB8
LinkDB
All DBs
Position
1:complement(2212974..2213984)
Genome browser
AA seq
336 aa
AA seq
DB search
MANKTTDFPVKQRQLNEDIKNGNFQRCYLVYGEEAYLRNQNRDKLVKALAGDPASMNFSR
YEGDSLNPGEIIDMAETMPFLSDKRVILVENSGFFKSGCAELAEYLKNPSETTFFIFAEK
EVDKRKDIYKTVSKIGFEICCDEQDERMLSSWIASKVKSEDKIISPRALSFLIDRVGTDM
SNISTELEKLICYCLDRSEITEEDIEAVCANWLTNRIFAMTDAIVEKNQKRAIDLYYDLL
ALKEPPAKILALITRQFNLMLQVKEMNENHRDNGSIASAVKLAPFLVNKYIGWARGYSRA
ELQEALELCAANDEAVKTSKLDYVISVEMVIIKCTA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataagacaacagattttccggtaaaacaaagacaacttaatgaagatattaaa
aatggcaactttcagagatgctatcttgtatatggagaagaggcataccttagaaaccag
aacagggacaagctggtaaaagcacttgcgggtgatcctgcttcaatgaattttagcaga
tatgagggtgattctcttaatccgggcgagataatagacatggctgaaactatgcctttt
ttatctgataaaagagttattctcgttgagaacagtggcttttttaagagcggatgcgct
gaacttgccgaatatctcaagaatccatctgaaactaccttctttatttttgcagagaaa
gaagtggataagcgtaaggatatttataagaccgtttccaagataggatttgagatatgc
tgtgatgagcaggatgagagaatgctttccagctggattgcttctaaggttaagagcgag
gacaagattatttctccaagagctctttcttttctgatagacagggttggaacagacatg
tccaatatcagtacagagcttgagaagcttatatgctactgtctggacagaagcgagatc
acagaagaagatatcgaagcggtttgtgctaactggctcactaacagaatatttgctatg
acagatgcaattgttgagaagaaccagaaaagagcaattgatctctactatgatcttctg
gcactcaaggagccacctgccaagatccttgctcttataaccagacagtttaacctcatg
ctacaggtcaaggagatgaatgagaatcatagagacaatggttctatagccagtgctgtc
aaactggctccattccttgttaataaatacataggttgggccagaggctattcaagagct
gaattacaggaggcacttgaattgtgtgcagctaatgatgaagccgtcaagacaagtaaa
cttgactatgttataagcgttgagatggttataataaaatgcactgcctga
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