Butyrivibrio proteoclasticus: bpr_I2258
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Entry
bpr_I2258 CDS
T01292
Name
(GenBank) ATP-dependent DNA helicase UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03420
Nucleotide excision repair
bpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
bpr_I2258
03430 Mismatch repair
bpr_I2258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_I2258
Enzymes [BR:
bpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bpr_I2258
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
bpr_I2258
MMR (mismatch excision repair)
Other MMR factors
bpr_I2258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
Viral_helicase1
SLFN-g3_helicase
DUF1664
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
ADL34991
UniProt:
E0RY36
LinkDB
All DBs
Position
1:2757418..2759460
Genome browser
AA seq
680 aa
AA seq
DB search
MEKEIFDQEQNHLSKTYGKLLEMKKDLESQISDLDAKALDDKNDIRDNIRFDYADIETTM
ETLAEIEVWNRYIDTYNVESSSLGKRLKTVNKLLESPYFAKISLQFDPSEEPESYYIGRA
PISENGYDQMVVDWRSPIAEVYYNQESGHTSYTVEDRVIPVDLKLRRQFDINKDKLISYF
DTQIAIEDPMLLQSLSQMRSDKMQAITATIQKEQNTVIRYPDVPVLLVNGIAGSGKTSVL
LQRIAYLFYQKRKTLRPDQVCLMTLNPVFRDYIDNVLPDLGETNPLTITWNEFLDMVHVP
FTENGSDHTLSESLLKIHECLPTLTPEADDFFDIRQKETIVMNKNEVLSVVKMFKQFPMG
VRLIQTVADELEHRAKNALHNLDKETEEESEGSPKSDSAENNRIENDYGGALRSIRHCGF
VNVMHIAKRILGTDHITAAEWLYTKMELTGLCDRNMKYMMIDEVQDYTKAQLMVFRKFFP
NAKFMLLGDENQAIREGTISFSEIKELAEADDKKFVELPLMTSYRSSPEITEMFASLLPS
EKKMLVSSVQRPGEKVAMFSLDSDDEYYTKLTSLISEYSEKSGLTAVIFRNQFSLDKAIA
KLGDKAPVVIEENDSLPSSGAFLIELSLAKGLEFDNVIIADADNDSYPADELGKHCLYTA
MSRATQHLSILAKGKLSDCI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagagatatttgatcaggaacaaaatcatttgagcaaaacctatggcaagctt
ctggaaatgaagaaagacctggaaagtcagatttcagatcttgatgccaaggccctggat
gataaaaatgatattcgagacaatatccgcttcgactatgcagatattgaaacgaccatg
gaaactctcgcagagatagaagtttggaacagatatattgatacatataatgttgagagc
agttcacttggtaagagactaaagactgtcaacaagcttctcgaatcgccttactttgcc
aagatcagtttgcaatttgacccatctgaagagcccgaaagctattatataggaagggct
cctatttccgagaatggttatgaccagatggttgttgactggagatctccaattgctgaa
gtgtactacaatcaggaaagcggccacaccagctacacagttgaggacagagttattcct
gtagatcttaaattaagacgtcagtttgatatcaataaagacaagctgatttcttatttt
gatacacaaattgctattgaagacccaatgctcctgcagtccctgtctcaaatgcgctca
gacaagatgcaggcaatcactgcaaccattcagaaggagcagaacacagttatccgctat
cctgatgtacccgtacttcttgtaaacggaatcgcaggaagtggtaaaacctctgtactt
cttcagcgaattgcatatctcttttaccagaaaagaaagactctgcgtccggatcaggtg
tgtctcatgacacttaatccggtatttcgtgactatatagacaatgtccttcctgacctc
ggggaaacaaatccactgaccattacctggaacgaatttctcgatatggtccatgttcca
ttcacggaaaatggttcagatcacacactgtcagagagtcttcttaagattcacgagtgt
ttaccaacactcactcctgaagcagatgatttcttcgatatcaggcaaaaagagaccatt
gtcatgaacaaaaacgaagttctctctgtcgttaagatgttcaaacagtttcctatggga
gtacgtctcatccagacagttgcagatgaacttgagcatagagccaagaatgctcttcac
aatcttgataaagaaacagaggaagagtcagaaggatcaccaaaatctgattctgccgag
aataacagaattgaaaatgattacggcggagcacttcgcagcatcagacactgcggtttt
gtgaatgtcatgcacatagccaaaagaattcttggtactgatcacattactgctgctgaa
tggctctacaccaagatggagcttacaggcctgtgcgaccgcaacatgaagtacatgatg
attgatgaagttcaggattataccaaggctcagctcatggtatttagaaaattcttcccc
aatgccaaatttatgctccttggtgatgagaatcaggccatcagggaaggcactatttct
ttttctgagataaaagagcttgccgaagccgatgataaaaaatttgtcgaattgccacta
atgacaagttacagaagttcaccggagattacagagatgttcgcttctcttctgccttca
gagaaaaaaatgctggtttcctcagtgcaaaggccgggagaaaaagtagctatgttctct
ttggattcagatgatgagtattacacaaaactcacatctctcatttcagaatatagtgaa
aaatcaggacttactgccgttatattcagaaaccagtttagtcttgataaagcaatagcc
aaacttggagataaagcccctgttgtaatagaagaaaacgattctcttccatcttccgga
gcttttctcattgagctttctcttgctaagggacttgaatttgacaatgtcatcattgcc
gatgcagacaacgacagctatccggcagacgagcttggaaagcactgcctctacaccgca
atgtcacgtgcaacacagcacttgtcaattcttgcaaagggtaaactctcagattgtatt
taa
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