Butyrivibrio proteoclasticus: bpr_I2369
Help
Entry
bpr_I2369 CDS
T01292
Symbol
rpoB
Name
(GenBank) DNA directed RNA polymerase beta subunit RpoB
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
bpr_I2369 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpb03021
]
bpr_I2369 (rpoB)
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_I2369 (rpoB)
Enzymes [BR:
bpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
bpr_I2369 (rpoB)
Transcription machinery [BR:
bpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
bpr_I2369 (rpoB)
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
bpr_I2369 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ADL35102
UniProt:
E0RZ30
LinkDB
All DBs
Position
1:complement(2894695..2898567)
Genome browser
AA seq
1290 aa
AA seq
DB search
MSMEKNRLHPTGSGKNIRMSFQRQKEVLEMPNLIEVQKNSYQWFLDEGLKEVFDDISPIE
DYSGKLSLEFVDFKLCEDEIDKNKNTIEKCKERDATFAAPLKVKVRLHNKEKDEITEHEI
FMGDLPLMTATGTFVINGAERVIVSQLVRSPGIYYDITYDKIGKELMACTVIPNRGAWLE
YETDPNDVFYARVDRTRKVPVTVLIRALGIGSNEEILELFGDEPKIQGSFSKDSSTDYQS
GLLELYRKIRPGEPLSVESAESLINAMFFDPRRYDLAKVGRYKFNKKLHFKNRINGHVLA
EDVVDETTGEMIASAGTKVDRALATEIQNAAIPYVLLQEEERNVKVLSNMMVDITHFIEC
DPAELGINENVYYPVLKEILDEYTAKNDPEGLAETIKKRVHELIPKHITKEDIIASINYN
IHLEYGIGNDDDIDHLGNRRIRCVGELLQNQYRIGLSRLERVVRERMTTHDTEEVSPQTL
INIKPVQAAVKEFFGSSQLSQFMDQNNPLSEITHKRRLSALGPGGLSRDRAGFEVRDVHY
THYGRMCPIETPEGPNIGLINSLASYARVNDYGFVEAPYRVVDRTDPENPRVTDEVEYLT
ADEEDNYHVAQANTPLDEEGHFVKKTVSGRFREETSEYPKTAVEYMDVSPRMVFSVATAL
IPFLENDDANRALMGSNMQRQAVPLLMTEAPAVGTGMEKKAAVDSGVCVVARKAGTIDFV
DSKLIQITYDDGEKEEFHLIKFQRSNQSNCYNQRPIVFKGDHVEAGQVIADGPSTSQGEL
GLGKNPLIGFMTWEGYNYEDAVLLSERLVRDDVYTSVHIEEYEAEARETKLGPEEITRDV
PGVGDDALKDLDDRGIIRIGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVR
DTSLKVPHGEYGIVVDAKVFTRDNGDELSPGVNQAVRIYIAQKRKISVGDKMAGRHGNKG
VVSRVLPIEDMPYLPNGRPLDIVLNPLGVPSRMNIGQVLEIHLSLAAKALGFNIATPIFD
GANEIDIQDTLELANDYVNSTWDEFQAKYKDLVHPEIMDYLYENRDHRELWKGVPIRSDG
KVQLRDGRTGQKFDSPTTIGHMHYLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQ
RFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIIKGDNIPEPGVPESFKVLLK
ELQSLGLDIKVLREDNTEVEIMESVDYTDSDYRFEMEGDNARDYSQESFEANGYSKQHFD
ESGELVAEAEDADEFESEDSFEDFDSSDDE
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggaaaaaaacagattacatcctaccggctctggtaaaaacattcgtatgagt
ttccagcgtcagaaggaagtcctggagatgccaaacctgattgaagtacagaagaattca
tatcagtggtttcttgacgaaggcttgaaggaagtctttgacgatatttctccaattgag
gactacagcggcaagctcagtctggaatttgttgatttcaaactttgcgaggatgagatt
gacaagaacaagaacacgattgagaaatgcaaggagagagatgcaacatttgctgcacct
ttgaaagtaaaggttcgtcttcataacaaggagaaagacgagatcacagaacatgaaata
ttcatgggcgatcttcctcttatgacagctacaggtacctttgttatcaatggcgcagaa
agagttatcgtcagccagttagttcgttcacccggtatttattatgatattacatacgat
aagatcggtaaggagcttatggcttgcactgttatccctaacagaggtgcatggcttgag
tatgagactgatcctaatgatgtattctacgcaagagtagacagaacaagaaaagttcct
gttactgttcttatcagagctcttggtattggatctaatgaggagattctcgaactcttt
ggtgatgagcctaagattcagggaagtttttctaaggattcttctacagattaccagagt
ggtcttcttgaactgtacaggaagattcgtcctggtgaaccacttagtgttgaaagtgct
gagagccttatcaatgctatgttctttgaccctagaagatatgatcttgctaaggttggt
agatacaaatttaataagaaattacatttcaagaaccgtattaatggacatgttctcgct
gaggatgttgttgatgagacaacaggtgagatgatcgcttctgctggtaccaaggtagat
cgtgctcttgctacagagattcagaatgcggctattccttatgttcttttacaggaagag
gagagaaacgttaaggttctttctaatatgatggttgatattacacacttcatcgagtgt
gatcctgctgaacttggaattaatgagaatgtttattatccggttcttaaggaaattctt
gatgagtatactgccaagaatgatcctgagggacttgcagaaacaatcaagaagcgcgta
catgagcttattcctaagcacattaccaaggaagatatcattgcttctattaactacaat
atccatcttgagtacggtattggtaatgatgatgatatcgaccacttgggtaacagacgt
atccgttgcgtaggtgagcttttacagaaccagtatagaattggtctctcaagacttgag
agagttgttcgtgagagaatgacaactcatgatacagaggaagtttctccacagactctt
attaacattaagcctgtacaggctgctgttaaggagttctttggatcatcacagctgtct
cagttcatggatcagaacaaccctctgagtgagattacacataagagacgtctttcagca
cttggtcctggcggtctttcaagagatagagccggattcgaggttcgagacgttcactat
acacattatggacgtatgtgtcctatcgagacacctgaaggtcctaacatcggtcttatc
aactctcttgcaagttatgcaagagttaacgactatggtttcgttgaggcaccatatcgt
gtagtagacagaacagaccctgagaatcccagagttactgatgaggttgagtaccttaca
gctgatgaagaagataattaccatgtagctcaggctaacactcctcttgatgaggaaggc
cacttcgttaagaagactgtttcaggacgtttcagagaggaaacatctgaatatcctaag
acagctgttgagtacatggacgtatcacctagaatggtattctcagttgctacagcactt
atcccattccttgagaacgacgatgctaaccgtgccctcatgggatcaaacatgcagcgt
caggcggtgccacttcttatgacagaagctcctgcagttggaacaggtatggagaaaaaa
gcagctgttgactcaggtgtatgtgtagttgcaagaaaagctggtactattgattttgtt
gatagtaagcttatccagattacatatgatgatggcgagaaggaagaattccatcttatt
aagttccagagatctaaccagagtaactgctacaaccagagacctatcgtatttaagggc
gatcatgttgaggcaggacaggttattgcagatggtccttctacatcacagggagaactt
ggtcttggtaagaaccctcttatcggtttcatgacttgggaaggttataactacgaggat
gctgttcttctttcagagagacttgtacgtgatgatgtttatacatctgtacatattgag
gagtatgaggcagaggctcgtgaaaccaagctcggacctgaagagatcactcgtgacgtt
ccaggcgtaggtgatgatgcactcaaggatcttgatgatcgcggaatcatccgtattggt
gcagaggttcgtgccggtgatatccttgttggtaaggtaacacctaaaggcgagacagag
cttactgcagaagagagactccttagagcaatcttcggtgagaaagcaagagaggtaaga
gatacatctcttaaggttcctcacggtgaatatggtattgttgtagatgccaaggtattt
acaagagataatggcgatgagctttcacctggtgttaatcaggcagttcgtatctatatc
gctcagaagagaaagatttctgtaggtgataagatggctggtcgtcatggtaacaagggt
gtcgtatcacgtgtacttcctatagaggatatgccatatcttccaaatggtagaccactt
gatatcgtgcttaatcctctgggcgttccttcccgtatgaatatcggacaggtccttgag
attcacctttctcttgcagctaaggctcttggatttaacatcgctacacctatttttgat
ggtgctaacgagatagatattcaggatactcttgaacttgccaatgactatgtaaatagc
acatgggatgagttccaggctaagtacaaggatcttgtacatcctgagattatggattac
ctctatgagaacagagatcacagagaactctggaagggtgtcccaatcagatcagacggt
aaggttcagctgcgtgatggtagaacaggacagaagtttgatagcccaacaactatcgga
cacatgcattacctcaaactccatcacctggtagatgataagatccatgctcgttcaact
ggtccttactctctcgtaacacagcagcctctgggtggtaaagctcagttcggtggacag
cgtttcggagaaatggaagtttgggctctcgaggcttatggtgcagcttacacacttcag
gaaatacttacagttaagtctgatgatgttgtaggacgtgttaagacctacgaggcaatt
attaagggtgataatattcctgaacctggtgttccagaatcattcaaggttcttctcaaa
gagcttcagtcccttggtcttgatatcaaggtacttcgtgaagataacactgaagttgag
atcatggagagcgttgattatacagattcagattatcgttttgaaatggaaggcgataat
gcacgtgattacagccaggaatcttttgaggctaacggctattccaagcagcacttcgat
gagagcggcgagcttgtagcagaagctgaagatgcagatgaatttgagtcagaggattca
tttgaggattttgattcatctgatgatgagtaa
DBGET
integrated database retrieval system
