Butyrivibrio proteoclasticus: bpr_I2768
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Entry
bpr_I2768 CDS
T01292
Symbol
dnaE1
Name
(GenBank) DNA polymerase III E DnaE1
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03030
DNA replication
bpb03430
Mismatch repair
bpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
bpr_I2768 (dnaE1)
03430 Mismatch repair
bpr_I2768 (dnaE1)
03440 Homologous recombination
bpr_I2768 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpb03032
]
bpr_I2768 (dnaE1)
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_I2768 (dnaE1)
Enzymes [BR:
bpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
bpr_I2768 (dnaE1)
DNA replication proteins [BR:
bpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
bpr_I2768 (dnaE1)
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
bpr_I2768 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
Ribosomal_S13
HHH_3
DUF3067
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ADL35500
UniProt:
E0RZT4
LinkDB
All DBs
Position
1:3321646..3325185
Genome browser
AA seq
1179 aa
AA seq
DB search
MAFTHLHVHTEYSLLDGSNKIKEYVKRLGELGMTAGAITDHGVMYGVIDFYKACRDAGIN
PVIGCEVYVAPGSRFEKETAVSDDRYYHLVLLAENNVGYANLSHIVSRGFTEGYYYKPRV
DMELLEQYHEGIIALSACLAGEIPRNIVKGTPDKAKEAAIRLDNIFGHGNFFLELQDHGI
PEQRMVNASLMALSQELDIPLVATNDCHYTYADDAEAHDLLLCIQTGKXVSDEDRMRYEG
GQYYVKSEEEMRSLFPYAQEALDNTQKIADRCHVEIEFGVTKLPHFEVPEGYDSWTYLNK
LCLDGLHERYPDDDGTLKDKLDYELGVIKRMGYVDYFLIVWDYINYCRENGIAVGPGRGS
AAGSIVSYCMHITNIDPIKYDLLFERFLNPERVSMPDIDVDFEYERRQDVIDYVTEKYGA
DKVVQIITFGTLAAKGVIRDVARVMDLPYSFGDTISKMIPTELNITLDKALEMNPELRSQ
YESDETVHKLIDMCKKLEGLPRHTSIHAAGVVICSAPAEDLVPLSRSAEGNVTTQFTMTT
IEELGLLKMDFLGLRTLTVIKDATNFANRSLGAKPGDANYINIDEIDYNDPAVLASIGSG
RCDGVFQLESGGMQSFMKELRPQSLEDIIAGISLYRPGPMDFIPKYIAGKNDAGAITYQT
PELEPILKPTYGCIVYQEQVMQIVQQLGGYTLGRADLVRRAMSKKKQHVMEVERANFVNG
NPEENVPGCASKGISPEIGNAIYDSMMDFAKYAFNKSHAACYAVVALQTAWLKYYYPVEF
MAALMTSVIDNPGKVSGYIMSCRNMNIALLPPDINEGFDGFSVTEIDAGDNDKPIPGAVV
TTAPGRKKAIRYALTAIKGVGRPVIASIVQERQLHGKFKNLNDFLSRMQGRANDVNKRAV
ENFIKAGAFECFEGTRKQHMTVYAHIMDQLHNSNRNSMAGQMTLFDFAGEEEKKMYEIPL
PDVGEFPRELLLEFEKEVLGIYVSGHPLEEYIGIWKKKITNTTTDFYLDDETGVPVVRDN
ATVTIGGIISDKKVKYTKTDQIMAFLTVEDLVGSIEVIVFPKTYEANAPRLNEDAKVFIE
GRVSVEDDRDAKLIASKIMLFDEVQKTVWLRFPNKEDYEAKAFSVQQVLSQSDGRDEVAI
YLTDTKQIKKLGKAHTIKADKDTLEALADILGKENVQVT
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggcatttactcatttgcacgtccacacagaatactctcttctggacggatccaataag
ataaaagaatatgttaaacgccttggagaacttggcatgaccgccggtgctatcacggac
catggtgtcatgtatggcgttattgatttctataaagcctgtcgcgatgcgggcatcaat
cctgtaatcgggtgcgaggtttacgttgctcccggttcccgctttgaaaaagagactgcg
gtttcagatgaccgatattatcaccttgtccttcttgctgagaacaatgtcggctacgct
aacctttcgcacattgtcagccgcggttttactgaaggctactactacaagccccgtgta
gatatggagcttttagagcagtaccatgaaggaattattgcgctttctgcctgtcttgcc
ggcgagattcccaggaacattgttaagggcactcctgacaaggccaaagaggcagcaatc
cgccttgataatatttttggccacgggaatttcttcttggaacttcaggatcacggaatc
cctgaacagaggatggttaacgcttctctcatggctctttcacaggagcttgatattccg
cttgttgcgaccaacgactgccactacacttatgcagatgatgcagaagctcacgacctt
cttctctgtattcagacgggtaaaaangtttccgacgaggaccgcatgcgctacgaaggc
ggccagtactacgttaagagtgaagaagagatgcgttctcttttcccatatgctcaggaa
gcgctagataatacgcagaagattgccgacagatgtcacgttgagattgagtttggcgtt
accaaattgcctcatttcgaggttcctgaaggatacgattcctggacttatcttaacaag
ctctgtcttgatggtcttcatgagaggtatccggatgacgatggcacgctcaaagacaaa
cttgattacgagctcggtgtcatcaagcgcatgggttatgtagattacttcctcattgta
tgggactacataaattactgccgtgaaaacggcattgctgtcggcccgggacgtggttct
gctgccggtagtattgtttcctattgcatgcatatcacaaacattgatcctatcaagtat
gatcttctctttgagaggttccttaatcctgagcgtgtttccatgcctgatatcgacgtg
gatttcgagtacgagaggcgtcaggatgttatagattatgtcactgagaaatatggcgct
gacaaggttgtgcagatcatcactttcggtacacttgctgccaagggagttatccgcgat
gttgcaagagttatggaccttccttacagctttggcgatacgatttccaagatgatccct
acagagctcaacatcactctggacaaggctcttgagatgaatcccgagcttcgcagccag
tacgagagcgatgaaacagttcacaagctgatcgatatgtgcaagaaactggaaggactt
cctcgtcacacctctatccatgcggcaggtgtcgttatctgttcagctccggctgaggat
ctggtgccactctcccgctctgcagaaggaaacgtcacaactcagttcaccatgaccacc
atcgaggagcttggccttctcaaaatggactttttgggccttcgcacccttactgttatc
aaggatgcaactaattttgccaaccgctctctcggcgccaagcccggagatgccaattat
attaatatagatgaaatagactacaatgaccctgctgttcttgcttctatcggaagtggc
cgctgtgacggtgtcttccagcttgaatcaggtggaatgcagtccttcatgaaggagttg
cgccctcagtcgcttgaagatattatcgcgggcatatcactttatcgcccgggccctatg
gactttattcccaaatacattgcgggtaagaatgacgcaggggctataacctatcagacg
cctgaactggagcctatcttgaagcccacctatggctgtatcgtttatcaggagcaggta
atgcagatagttcagcagcttggtggctacactcttggacgagctgaccttgtaagacgt
gccatgagtaaaaagaaacaacatgtcatggaagtagaaagagctaacttcgtaaacggc
aatcctgaggagaatgttccgggatgtgcttcgaaggggatttctccagaaattggtaat
gctatctacgattccatgatggattttgccaagtatgcctttaacaaatcccacgccgcc
tgttacgcagtagttgcccttcagaccgcatggctcaagtactattatcctgtcgagttc
atggctgcgcttatgacctctgtcattgataatccgggcaaggtttcgggatatatcatg
agctgcaggaatatgaacatagctcttttgccacctgatattaatgaaggcttcgatgga
ttctctgttacagagattgatgctggggataatgataagcctattcctggcgccgttgta
acaactgctcccggccgcaagaaggcaatccgctatgccctcacagctatcaagggcgtt
ggaaggccggttatagcttcgattgtgcaggagagacagctccatggcaaattcaagaat
ctcaacgacttcctgtccagaatgcaggggcgtgccaatgatgtcaacaagcgagctgtt
gagaactttatcaaagcaggagcatttgaatgttttgagggaactcgcaaacaacatatg
actgtttatgctcacattatggatcagctccacaactccaaccgcaattccatggcaggc
cagatgacactgtttgattttgccggggaagaggagaaaaaaatgtacgagattcccctt
cctgatgttggagaatttccacgtgagcttcttcttgagtttgagaaagaggtgcttgga
atctacgtttcaggccatcctcttgaagaatatatcggaatatggaaaaagaagatcacc
aataccaccactgacttttatcttgatgatgaaacaggtgtccctgtagtacgtgataac
gcgactgtgactatcggtggaatcataagtgacaagaaggtcaaatacaccaagacggac
cagataatggcctttctgactgtggaagatctggtcggctctattgaagttatcgtcttc
cccaagacctacgaagccaacgctccgcgccttaatgaagatgcaaaagtgttcatagaa
ggccgtgtttctgtcgaggatgaccgcgatgccaagctgatagccagtaagataatgcta
tttgatgaggtgcagaagactgtatggctgcgtttcccaaacaaagaggattacgaggcc
aaggcattttctgtacaacaagtgctgtcgcagagtgacggacgcgatgaagttgcgata
tatttaaccgacaccaagcagatcaagaagcttggcaaagcccataccatcaaggccgac
aaggatacacttgaagctcttgcagatattcttggaaaagagaatgtacaggtgacgtga
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