Butyrivibrio proteoclasticus: bpr_II238
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Entry
bpr_II238 CDS
T01292
Name
(GenBank) ATP-dependent DNA helicase UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03420
Nucleotide excision repair
bpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
bpr_II238
03430 Mismatch repair
bpr_II238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_II238
Enzymes [BR:
bpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bpr_II238
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
bpr_II238
MMR (mismatch excision repair)
Other MMR factors
bpr_II238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
A9CJY8-like_N
DUF4249
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADL36175
UniProt:
E0S443
LinkDB
All DBs
Position
pCY360:complement(166108..168882)
Genome browser
AA seq
924 aa
AA seq
DB search
MNNMNGQTQVAQAPATQNSAWSFSAFTNANMCNKGREFTFETKDTNLPENYYRKSLIMEC
IKAALQWGERRSEAIMDYLNSRYDDCGYKNTQQRQMNLLWDHKRVMRYLNCETRKATFLE
GGVIVMNGQSVKVKPDVCFIDDSKKSIELVRFQVGRPYLTQSGKKNAVIRDLKLFSMILY
GRELGYQNITASIYYLQKNDDVISGLAGKNFNPDFFEGGGNIVSLTDEGYMGHPTELDKL
MEDAFAVMNTGIDEEKMHAEDCEKCPKYDICQYTLPPIRLEEEASTKDISNLKLTQAQTA
AVNVTNGFWRINAGAGAGKTMVTALRVWNLLNQGVRPEEILLITFTNAGAKEMRDRIQLC
IETFKLNYRVNLDDMIICTFNAFGDLVIGDNYANLGYTKKPKIIDDVERYGIIARLMNEH
PIPSWTGESFLYYNSRQKHQKGALAIVSEIFRMIKQRGGDITNITASDVRDAAYNCDVPD
VALMEVIKLYPLYAQQLMDRNLIEYVDQEILPFQVFESVDPSYLNNRFLFKHIIVDEFQD
SNEGQIELLKILKTLPTFQSLMVVGDDSQAIFGFRETSPEYIINFASYIGEQVQDIFLVE
NHRSTPEIIEFANKLNSLNKEKVEKDLVATRPSGAGVVVNGFYSRDDEYDWIVQSIKQQL
DNGRRPEQIAVIAYTKAELQRLADALSKHKLPTVLLAPEKLMTNSRIRAILSFVRVLGDS
ADTKDALIAANAVVGGCIMDLPNQKIQQLVDNIIVRAENIRNAASLAAKKDGLMKFIDSI
AMDDETVQAFKESLETKEYGEILQYCIDFSLYGEDTEYRRVSNYPGIVLTTAHSSKGLEW
PVVYNTVTRYQTQARVSEETRRLLFVSATRARDELYISGTYAAFGKGENLVKNHYLQEAF
DIVGKQYNPTFSTSKKTSYTPLSA
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatgaatggacagacacaggtagctcaggcacctgcaacacagaacagtgca
tggagcttttcagctttcacaaatgcaaatatgtgcaataagggacgtgagtttactttc
gagacaaaggatacaaaccttcccgagaactattacagaaaatctcttatcatggagtgc
attaaggcggctctccagtggggagaaagaagatctgaggctattatggactaccttaac
agccgttatgacgactgtggatacaagaacactcagcagcgccagatgaatcttctctgg
gatcacaagagagttatgcgttatcttaactgcgaaaccagaaaggcaactttccttgaa
ggcggagttatcgtaatgaatggccagtctgtaaaagttaaaccggatgtatgctttatc
gatgacagtaaaaagtctatcgagcttgtccgtttccaggttggaagaccttatcttact
cagagtggtaaaaagaatgctgttataagagatcttaagctcttttctatgatcctttat
ggtcgagagcttggttatcagaatattacagcttctatctactaccttcagaagaatgat
gatgttattagcggtcttgccggtaaaaacttcaacccagacttcttcgagggcggtgga
aacatcgtaagccttacagatgagggctacatgggacatcctacagagcttgataagctc
atggaagatgcttttgccgtaatgaacaccggtatcgacgaggaaaagatgcatgcagag
gattgcgaaaagtgccctaagtatgacatctgtcagtacacacttcctcctatcagactc
gaggaagaggcttcaacaaaggatatttcaaatcttaagcttactcaggcacagactgct
gccgtaaatgttacaaacggattctggcgtattaatgctggtgccggagctggtaagaca
atggtaaccgcacttcgcgtatggaaccttcttaaccagggagtaagaccggaagagatc
cttcttatcactttcaccaatgctggtgctaaagagatgagagaccgtatccagctttgt
attgagacatttaagcttaactacagagtaaatcttgatgacatgatcatctgtaccttc
aatgcttttggagaccttgttatcggcgataactatgctaaccttggttatacaaaaaag
cctaagatcattgatgatgtagaacgttatggaatcattgctcgtcttatgaacgagcat
cctatcccatcatggacgggagagtcattcctttactacaattcaagacagaagcaccag
aagggagctcttgctattgtcagcgagatcttcagaatgatcaaacagagaggcggagat
attacaaatatcactgcttcagatgtaagagatgcagcttataactgcgacgttcctgat
gttgcacttatggaggtaatcaagctttatcctctttatgcacagcagctcatggacaga
aatctcatcgagtatgtggatcaggaaatccttcctttccaggtattcgagtcagttgat
ccatcttaccttaataacagattcctgtttaagcacattattgttgatgagttccaggat
tctaacgagggacagatcgagcttttgaagatccttaagacacttcctacattccagtca
cttatggttgtaggagatgactcacaggcgatcttcggattccgtgagacatctcctgag
tacatcattaactttgcaagctacatcggagaacaggtacaggatatcttccttgtggaa
aatcacagatcaactcctgagatcatcgagtttgcaaataagctcaattctcttaataaa
gagaaagttgaaaaggatcttgttgctacaagaccttcaggagcaggagttgtagttaat
ggattctattcaagagatgatgaatatgactggatcgtacagagtatcaaacagcagctt
gataacggaagacgtcctgagcagattgctgttatcgcctacactaaggcagagcttcag
agacttgcagatgcactttctaagcataagcttcctacagtgcttcttgctcctgaaaag
ctcatgacaaacagccgtatcagagcaatactgtcattcgtaagagtgcttggagattca
gctgataccaaggatgcccttattgcggcaaatgctgtagttggcggatgcatcatggat
cttcctaaccagaagatccagcagcttgtagacaatattattgttagagctgagaacatc
agaaatgcagcttcacttgcagcaaagaaggacggtcttatgaagttcatcgattctatt
gccatggacgatgagacagttcaggcattcaaggagtcacttgagactaaggaatatggc
gaaatccttcagtattgtatcgatttctcattatacggagaagatacagagtacagaaga
gtatctaactaccctggtattgttcttacaacagcccattcatcaaagggacttgagtgg
ccagtagtttataatactgtcacaagatatcagacacaggcaagagtttctgaggaaaca
agaagacttctctttgtatctgctacaagagctcgtgacgagctttacatcagcggtaca
tatgcggcatttggtaagggtgagaaccttgtcaagaaccactacctgcaggaagcattt
gatattgttggaaagcagtataatccaacattctcaacttcaaagaaaacctcatatact
ccacttagtgcttaa
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