Butyrivibrio proteoclasticus: bpr_II305
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Entry
bpr_II305 CDS
T01292
Symbol
recJ2
Name
(GenBank) ssDNA exonuclease RecJ2
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03410
Base excision repair
bpb03430
Mismatch repair
bpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
bpr_II305 (recJ2)
03430 Mismatch repair
bpr_II305 (recJ2)
03440 Homologous recombination
bpr_II305 (recJ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_II305 (recJ2)
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
bpr_II305 (recJ2)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
bpr_II305 (recJ2)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
bpr_II305 (recJ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
CNOT1_TTP_bind
Motif
Other DBs
NCBI-ProteinID:
ADL36242
UniProt:
E0S4B0
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All DBs
Position
pCY360:complement(244852..246483)
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AA seq
543 aa
AA seq
DB search
MYKKQGDYQTLDEYVRFKTGKSIPELDAYKAFYEIRRLEKAAEMIKRHIAAQLPIAVFTD
YDVDGLGAALIMIQLLQALGAQYYVYAPRRSVDGYGITNNFVSKLSGYRGLLITVDNGIA
AIEQVNRAKALGWEVLIMDHHHALENDGIPEIPRADLIIDPEVFGTGCDFTHYCGAGLAF
KLAQFMLDDQYLIDKLNTFAAISTVADVVPLIEDNRQIVKRGLELMNRGVGTVGLQKLLE
YLQIRGFATAKDLGFSIGPMMNAATRMEAMYEGWNGSDFVINALLCEDEMLASQYSMQLS
EINKQRKEITAAALETVKCDILDSVNFIKVDAPAGLCGIIAPRVMEQNPKPTFVFMEENG
VCTGSARSDDETQNNVKEMLETCRDLLIKYGGHPGAAGFSFKIENMDEIHKRLSEYPVVS
NALKQVYDLELNKEDIVSTLCELDRIEPFGKGLEAPIFRVACRFNDRDQNGNITEYWHGM
GKDGSHLRLDLTPQLKAVAFNMKPQFDEMGHPKQLYLIGRPGWNIYDGKRIAQFRCEAIE
KMK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaagcagggtgattatcaaacccttgatgaatatgtaagattcaagacaggc
aaaagtattcctgagcttgacgcctataaggcgttttatgagatcagacggcttgaaaag
gctgctgaaatgataaaaagacatatcgcagcacagctaccaattgctgtgttcacggat
tatgatgttgacggactgggagctgcacttattatgatccagctgctccaggctcttgga
gcacagtattatgtatatgctccaagacgctcggtcgatggatatggtataacaaataat
tttgtatcaaagttaagcggttatagaggacttcttattacggtagacaatggcatcgct
gccatagaacaggtaaatagagccaaggcgcttggctgggaagttcttattatggatcac
catcacgctcttgaaaatgatggaattcctgaaattccaagagctgatcttattatcgat
ccggaagtttttggtacgggatgtgattttacacattattgcggagcaggtcttgcattt
aagcttgctcagtttatgctagacgaccaatacttaatcgacaaattaaacacgtttgca
gcgattagtacagtagctgatgtcgtgcctttaattgaggataacaggcagattgtaaaa
agaggcctggaactcatgaacagaggtgttggtacggtaggtcttcaaaagcttttggaa
tatctgcagattagaggattcgccactgctaaggaccttggctttagtatcggtccaatg
atgaacgctgcaacaagaatggaagcaatgtatgaaggctggaatggttctgattttgtt
atcaatgcgcttttatgcgaggatgagatgcttgcaagtcagtattctatgcagctttca
gaaataaataagcagcgcaaggagattacggcagcagcccttgagactgtaaagtgcgat
atactcgacagcgtaaactttatcaaggtagatgctcccgcaggcctttgcggaatcatt
gctccaagggttatggaacagaatcccaagccaacttttgtatttatggaagagaatggc
gtatgtacgggttctgcaagatcagatgatgaaactcagaataatgtgaaagagatgctt
gaaacatgcagggatctgcttatcaaatatggcggacatcctggggcggcaggattttca
tttaagattgaaaacatggatgaaatccataagcgtttgtcggaatatcctgtagtttca
aatgcactaaagcaggtttatgatcttgagcttaataaggaagatatcgtatcaactctt
tgtgaactggatcgtattgagcctttcggaaaaggacttgaggcgccaatctttagggtt
gcttgtagatttaatgatagggaccagaatggcaatatcactgaatactggcacggtatg
ggcaaggatggctcacatcttagacttgatcttacccctcagctcaaagctgttgctttt
aacatgaagccacagtttgatgagatgggacatccaaagcagctttatcttatcggaaga
cctggttggaacatctatgatggcaaaagaattgctcagtttagatgcgaggctattgag
aaaatgaagtaa
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