Butyrivibrio proteoclasticus: bpr_II346
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Entry
bpr_II346 CDS
T01292
Name
(GenBank) ATP-dependent DNA helicase UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03420
Nucleotide excision repair
bpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
bpr_II346
03430 Mismatch repair
bpr_II346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_II346
Enzymes [BR:
bpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bpr_II346
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
bpr_II346
MMR (mismatch excision repair)
Other MMR factors
bpr_II346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
DUF5382_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADL36283
UniProt:
E0S4F1
LinkDB
All DBs
Position
pCY360:complement(288188..290119)
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AA seq
643 aa
AA seq
DB search
MSVNLNELNEDQKKAATCIEGPVIILAGAGSGKTRTITYRIAYMIDAGIDTRNILAITFT
NKAAKEMKERALALLDDKVLPPTLTTFHSFGLTIMRKSGILLGYRKNIQVCDAEDSVKRI
KKIVKNKGFEKELVSQFADMISRAKDKLLEPSDIEVYEQGSVYDQFKQVYYAYQAGLKND
NMVDFDDLIMKPVQLFRSNPAALNWYQDHYRYLMVDEYQDTSHSQFELVRLLADKYKNIC
VVGDDYQSIYGFRGADISNILNFKNHYPSAYTVTIGQNYRSTHVIVNAAAAVIENNPDQL
KKKLCSMQDNGIPIPVHAADDDRDEANFVANKIMKALDKGRQPKEFAVLYRKNAFSRSIE
DALMHLHIPYRIFGGLSFYQRSEIKDMVAYLKLLDVEGSGDRIALERVINVPKRGIGQAK
IKMLDEIAEKADDNSFNVAMTAPEFDKVKGFISFREAIKTLQESAKELPLDELILKISEV
TDYPTYLMQGKSKSDDEDEVKKRMLNISELANKANEYIKEHEDMSKEELLSTFLADIALL
TDQDMAKDDNVVSLMTMHRSKGLEFEYVFIIGCEEGCFPDDPPYMGNTLDVQEDRRLCYV
GMTRAKKVLFMTYSKQRYLYGQIKINDPSRYLDEIPDEYKKEV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaatcttaatgagcttaacgaagaccagaaaaaggcagcaacatgcattgaa
ggccctgtcatcattctggcgggagcggggtctggcaagacaagaacaatcacatacaga
attgcatatatgatagacgccggtattgacacgagaaatatcctcgctatcactttcact
aataaagcagccaaagagatgaaggaaagagcactggcccttcttgatgataaagtcctt
ccgcctacgcttacaacattccattcgtttggactgacaataatgcgaaaaagcgggata
ctgctcggataccgtaaaaacatccaggtatgcgatgcagaggattctgtaaagagaata
aagaagatagtgaaaaataagggctttgagaaagagctggtatcgcagtttgcagatatg
ataagcagagctaaggataaacttcttgaaccttcagatatagaagtatacgagcagggc
tctgtgtacgaccagtttaagcaggtgtactatgcttatcaggcggggcttaagaatgac
aacatggtagattttgatgaccttatcatgaaaccggtacagctgtttagaagtaatcct
gcagcccttaactggtatcaggatcattacagatacctgatggttgacgagtatcaggat
accagtcattcccagtttgaactggtgcgactccttgcggataagtataagaatatctgt
gttgtaggagatgattatcagtctatttatggtttcagaggagcggatatatcaaatatc
ttaaactttaaaaatcattatccatcagcttatacagtaacaattggccagaactacaga
tcaacccacgttattgttaacgcggcagcagctgttatagaaaataatccggatcagctt
aaaaagaaactctgttccatgcaggataatggtattccaattcctgtacatgctgcagat
gatgacagagacgaagcaaattttgtagcaaacaaaataatgaaggcactcgataaagga
agacagccaaaagagttcgcagttctatatagaaagaatgctttttcgcgctcgatagaa
gatgcccttatgcatctgcatatcccgtataggatatttggcggactttccttttatcag
agatctgagataaaggatatggtcgcatatttaaagctccttgatgtagaaggctctggc
gacaggattgctcttgaaagagtcataaatgtacccaaaagaggtattggccaggctaag
ataaaaatgcttgatgagattgcagaaaaagccgatgacaacagctttaatgtggcgatg
actgcgcctgagtttgataaagtaaaaggttttatctcttttagggaggctataaaaacg
ctccaggaaagcgctaaagaactccctttagatgagctcatcttaaagatcagcgaagta
acagattatccaacctatcttatgcagggaaagagtaaatctgatgatgaagatgaagtt
aaaaagcgcatgctaaatataagcgaacttgcaaataaagctaacgaatatataaaagag
catgaggatatgtcaaaagaagaattattgtctacatttcttgcagatatagcgctttta
actgaccaggatatggcaaaggatgataacgtggtgtctctcatgaccatgcacaggtcc
aaaggtcttgagtttgagtatgtatttatcattggatgtgaggaagggtgcttccctgat
gatccaccatatatgggcaatactcttgatgtacaggaagacagacgcctttgctatgtt
ggaatgacaagagcgaagaaagtgctgtttatgacatactcaaagcaaagatacctctat
ggccagataaagataaatgatccttcaagatatcttgatgagatcccagatgaatataag
aaagaagtttaa
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