Butyrivibrio proteoclasticus: bpr_III098
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Entry
bpr_III098 CDS
T01292
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bpr_III098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpb03019
]
bpr_III098
Messenger RNA biogenesis [BR:
bpb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
bpr_III098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B_3
Lactamase_B
MCR_alpha
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ADL35786
UniProt:
E0S304
LinkDB
All DBs
Position
2:118081..120264
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AA seq
727 aa
AA seq
DB search
MDNKIRVTVYRGSEQIGGCCTEISYKDTRIAIDFGSPLPEDDAKELDVIGLTKGKSAFDA
VLFTHYHGDHVGEIGRINSDIPVYMGGFAKDVIAAYKGYNPHFFADVDIDRIDELVAGNE
ITIGSLRIMPILSDHSAAESFMFLIQADNFQILHTGDFRLHGLYREELLSSVKKLGKIDL
LITEGTTLSRKENANKAYTEEVVEEFMRNCVYENKYCFTILSSTNFDRFKDISDSVDRYR
MDNYPRGKYFVIDEFQKSLFEIAEKRLPDRYLFRTKTTYGKNIDAGMEDKGFIMMIRASK
ADHEALLRKYLEEYPEKTVLIYSMWSGYMKKGKLKELTDMARTKGCLRVIHSSGHVTKHD
LESFIEMVESEKVIVIHTEKSEGLDNLKNQISIEDGETKEFDGRYMDKLRLSKKITRDDS
GNCVILKLNGKTIKEDNMQTASNAFEGWACAIRAKENKEVVLDVDKETISEICLNDSEYT
AAGNGHICRFLYRVIKFQEQYKWFSLTENLKGIVKDFNDYLSKKDISFVNNPPTKDAEDN
SNKENLIESKLAEKQKLREIIGDTIDSDVYRQLPVGLFVNEKSKDNAIFTCGHSAIDLWS
IKDDTISIVELKAKNRMIGIITEIFFYVNYMNDFISPRSQYRFEFAKPLKYSQDSDDRGY
SKLYDSTKNEEIKKVVGIMLADDEDGFHTYIDQSVIDVMNDNEAKLKYMRAMYHITDFSI
IKSKKEN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggataataaaataagagtaactgtttatcgaggatctgaacaaataggtggatgttgt
acagagatatcatacaaagacactcgtatagctattgattttggtagcccacttccagag
gatgatgctaaggaactggatgttatagggctgactaaagggaaaagtgcatttgatgct
gtgttgtttactcattatcatggtgatcacgttggagaaataggaagaattaattctgat
ataccggtgtatatgggaggttttgctaaagatgttatagcagcttataaagggtataat
ccacatttctttgctgatgtcgatatagacagaatagatgaacttgtcgctggaaatgaa
ataacaataggatcattgcggataatgcctatattatcagatcattcggctgctgagtcc
ttcatgtttcttatacaggctgacaattttcaaatacttcatactggagattttaggctg
catggcttgtacagagaagaacttctttcaagtgtaaaaaagttagggaagatagacctt
ttgatcacagaagggactacgttatccagaaaagaaaatgcgaacaaagcgtatacagaa
gaagtagtggaagaatttatgcggaattgtgtctatgagaataagtactgctttaccatt
ctttcatcaaccaactttgatagatttaaagatatttcagatagcgttgataggtatcgt
atggataactatcctagaggaaaatactttgttatagatgaatttcagaaatctctgttt
gagatagctgagaagaggcttccggataggtacttatttaggaccaagactacatatggt
aagaacattgatgcaggcatggaagataagggatttatcatgatgattcgtgcaagtaag
gcagatcatgaggctttgctacgaaaatatctagaagaatatccagagaaaacagtcctt
atttattccatgtggtcaggctatatgaaaaaagggaagcttaaagaactaacagatatg
gctcgcactaagggatgcttaagggtaatccattcttctgggcacgtaacaaaacatgat
cttgaaagctttattgagatggtggaatcagagaaggtgattgtaatacatacagaaaaa
tcggagggattagataatcttaagaatcagatttctattgaagatggagaaacaaaggaa
tttgatggaagatatatggataaactaagactttcaaaaaaaataactagggatgatagt
ggcaattgcgtgattttaaaattaaacggaaaaactattaaagaagacaatatgcagacg
gcttcaaatgcgtttgaaggatgggcatgcgcaattagggctaaagaaaacaaagaggtt
gttttagatgtggataaggaaacaataagtgagatatgcctaaatgattctgaatataca
gcggctgggaatggtcatatatgtagatttttatatagagttattaagttccaagaacaa
tataagtggttttcccttacagagaatcttaaagggattgtaaaagactttaatgactat
ctaagtaaaaaggatatttcttttgtgaataatccgccaactaaggatgctgaggacaat
agtaataaggaaaatcttattgaatcaaagttagcagaaaagcaaaaactaagggaaatc
ataggggatactatagattctgacgtttatcgccagttaccagtgggattgtttgtcaat
gaaaaaagtaaagataacgcaatctttacatgtggccattcagcgattgatctttggagt
attaaagacgataccattagtattgtggaattaaaagcaaagaacagaatgattggcata
ataacggagatattcttttatgtaaactacatgaatgattttattagtccaagaagtcaa
tatagatttgaatttgctaaaccattaaaatattcgcaagacagtgacgacaggggctat
tcaaaattatatgattctactaaaaatgaagaaataaaaaaggtagtaggaataatgtta
gcagatgatgaagacggattccatacatatattgaccagtcagtgatagatgttatgaat
gataatgaagctaagttgaagtatatgagagcaatgtaccatatcacggattttagtatt
atcaaatctaaaaaagagaattga
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