Butyrivibrio proteoclasticus: bpr_III119
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Entry
bpr_III119 CDS
T01292
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bpb
Butyrivibrio proteoclasticus
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpb03016
]
bpr_III119
Enzymes [BR:
bpb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
bpr_III119
Transfer RNA biogenesis [BR:
bpb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
bpr_III119
Prokaryotic type
tRNA splicing ligases
bpr_III119
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
RtcB
SPOB_a
Motif
Other DBs
NCBI-ProteinID:
ADL35807
UniProt:
E0S325
LinkDB
All DBs
Position
2:143119..144087
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AA seq
322 aa
AA seq
DB search
MGPIGLTMTVKEAVIPALIGIDIGCGMSMVKLGKIRKDFQKLDTVIRDNVPVGFKVRNTV
HRDASDFDLGRLNCFKHIRDDKAMLSIGTLGGGNHFIELDADENGEGYLIIHSGSRHLGK
EVAEYYMDKGHKYLMEHGKENVPYELTYLTDELLSDYLHDIQVVQEYAELNRHIIMKEIC
KGMKWKVTDEKSCIHNYIEQTNGAAILRKGAISAKENQEVIIPINMRDGVILGIGKGNDE
WNSSAPHGAGRISSREKVTTSHTVSEFKASMKGIYTSCISNDTLDEAPFAYRDIDYIKEA
VKETVEITKLLKPVYNYKGGNA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgggccctataggccttaccatgacagtaaaagaggctgtaattcctgcacttatcgga
atcgacattggctgtggtatgagcatggtaaagcttggaaagatcagaaaggatttccag
aagctcgatacagtgattagagacaacgttccggttggattcaaggtaagaaacactgtt
cacagggatgcatcagattttgacctcggaagactcaactgctttaagcacatcagagat
gataaggcaatgcttagtatcggaactcttggcggaggaaaccactttattgagcttgat
gcagacgagaacggagagggatatctgatcattcacagtggcagccggcaccttggcaag
gaagttgcagagtattacatggacaaaggacacaagtatttaatggagcatggaaaagag
aatgttccatatgagcttacttaccttacagatgagcttctttcagactatcttcatgat
atccaggttgttcaggaatacgctgagctcaatcgtcacatcattatgaaggaaatctgc
aagggaatgaagtggaaggtaacagatgaaaagagctgcatccataactacattgagcag
acaaatggagcagctatccttagaaaaggtgccatctccgctaaggagaatcaggaggta
atcatacccataaacatgagagatggcgtaatccttggaatcggcaaaggcaatgatgag
tggaacagctcagcacctcatggggcaggcagaatttcatctagagagaaggttacaacc
agtcacacagtgtctgagtttaaggcttccatgaagggaatttacacaagctgcatcagc
aatgacacattggatgaggcaccctttgcctacagggatattgattacatcaaagaggct
gtaaaggagactgttgagatcacaaagctccttaagccggtttataactacaaaggaggc
aatgcttga
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