Butyrivibrio proteoclasticus: bpr_IV188
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Entry
bpr_IV188 CDS
T01292
Name
(GenBank) helicase RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
bpr_IV188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_IV188
Enzymes [BR:
bpb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
bpr_IV188
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
bpr_IV188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
AAA_23
PIF1
T2SSE
AAA_12
SLFN-g3_helicase
AAA_22
nSTAND3
Helicase_RecD
Cul7
DEAD
AAA_16
TraI_hel_assoc_N
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ADL36552
UniProt:
E0S570
LinkDB
All DBs
Position
pCY186:171855..173360
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AA seq
501 aa
AA seq
DB search
MDVLQTVESYINDTGSTWYKPSPKYKRLFDGGVKRKVLVEKNGYYTLPSVCSREIELAKR
IVTHLHFGEDERKRYPKEFIEIYIGFYEEQEGIRLDEWQKDAVFQSVNNNLFILTGGPGT
GKTATLKCILYCLKKILKTEDIIFTAPTGKAARRITESVGCPAQTVARALGLKDDNSKPK
PVNNACMIVDEISMLDTVTACALFTAISHETKLILVGDAEQLPSVGYGSVLRDLIDAGIP
TTKLEKTFRQASESGLFANIAQIKAGLYTGFEERDDFKVFKAENTSKAKEIMVREYLKAT
EKYGLDQVVCLTPYRRKGEACAIKLNNILQAIINPPKDNGLCFSYTTKEEDGFRYQTKLR
VGDPVMQLANAERVANGDVGTVCEIDKDKQRLKVQFSDCIVTYSKKQLSQLSLAYAMSVF
KSQGSEYKAVITSAISDDLDMLSRNTIYTAVTRAKQECIVVTNEDTAKKACKKESGYDRV
TRLSEEIMHQKARYELFISLM
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggacgtattacaaacagtcgaaagctacataaacgataccggatccacatggtacaag
ccttcacccaagtacaaaagactatttgatggaggcgtaaaaagaaaagtactggtcgaa
aagaacggttactacactctcccatccgtatgttcaagggaaatagaacttgcaaagcga
atagtcactcatcttcactttggtgaagacgaaagaaaaagatacccaaaagaattcata
gaaatctacataggattctacgaagagcaggaaggtatcaggcttgatgagtggcaaaag
gatgctgtttttcagagtgtgaacaataacctctttatccttacaggtggaccgggaaca
gggaaaactgcaactctaaaatgcatcctttactgccttaaaaagatccttaagacagag
gatattatctttactgctccaacaggaaaagccgcacgaaggatcaccgagtcggttgga
tgccctgcacagaccgtggcaagagctctggggcttaaggatgataactcaaaaccaaag
ccagtcaataatgcatgcatgatagttgatgagatatccatgctggataccgtcacagcc
tgcgcgctgtttaccgcaataagccacgaaacaaagctcatccttgttggcgatgcggag
cagcttccaagtgtaggctacggctctgtccttcgcgatctcattgatgcagggattcct
accacaaagcttgagaagacattcagacaggcttctgaaagcggactatttgccaacatt
gcgcagataaaagcaggtctttataccggctttgaagaaagggacgactttaaagtattt
aaagcagaaaacacttccaaggcaaaagaaatcatggtcagggaatacctaaaggccact
gaaaagtacggtctagaccaggttgtatgccttactccctacagacggaaaggtgaagct
tgcgcaataaagctaaataacatattgcaggctatcatcaatcctccaaaggataatggt
ctatgtttttcatataccacaaaagaagaggacggctttagataccagaccaaactaaga
gtcggtgatcctgtaatgcaactagccaatgctgaaagagtcgcaaatggcgatgttggc
actgtctgcgagattgacaaggacaagcagcgcttaaaggtacaattctcagactgcata
gttacttactcaaaaaaacagctatctcagctgtcacttgcatatgcgatgagtgtattt
aaaagccaaggctctgaatataaggcagttataacctctgctatttcagatgatctggac
atgctctcacgtaacaccatatatacagcagttacaagagctaagcaggaatgcatcgta
gttacaaatgaagacacagcgaaaaaagcctgcaagaaagagtccggatatgatagagtt
acacgtctttcagaagagataatgcatcaaaaagcgcgatatgaactgtttattagctta
atgtaa
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