Bordetella pertussis CS: BPTD_0107
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Entry
BPTD_0107 CDS
T01846
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bpc
Bordetella pertussis CS
Pathway
bpc00521
Streptomycin biosynthesis
bpc00523
Polyketide sugar unit biosynthesis
bpc00541
Biosynthesis of various nucleotide sugars
bpc01100
Metabolic pathways
bpc01110
Biosynthesis of secondary metabolites
bpc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BPTD_0107 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BPTD_0107 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
BPTD_0107 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BPTD_0107 (rfbB)
00525 Acarbose and validamycin biosynthesis
BPTD_0107 (rfbB)
Enzymes [BR:
bpc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BPTD_0107 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AEE65616
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Position
complement(106331..107392)
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AA seq
353 aa
AA seq
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MSILVTGGAGFIGSNFVLGWLASGDEPVINLDLLTYAGNAANLAALRDDPRHLLVHGDIA
DAPLVRRLLREHRPRAIVNFAAESHVDRAIRAPDAFVQTNVVGTFTLLEAARAYCTEQDA
AAAAAFRFLHVSTDEVYGSLAPQAAPFTETHPYQPNNPYSASKAASDHMVRSYRHTYGLP
AITTHCCNNYGPRQFPEKLIPLVIHHALAGRALPLYGDGMHVRDWLYVVDHCAALECVLR
DGQPGQTYNIGAHCERTNLEVVHAVCALLDQWRARPDGQPHAGGIAFIPERPGHDRRYAI
DAGKIQRELGWRAATSFEAGLRETVRWYLDHPQWVADIASGAYRHWLDTHYGT
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcattctcgtcaccggcggcgccggcttcatcggttcgaatttcgtgctgggctgg
ctggccagcggcgatgagccggtgatcaacctggacctgctgacctacgccggcaacgcg
gccaacctggccgcactgcgcgatgacccgcgccatctgctggtgcatggcgacatcgcc
gacgcgccgctggtgcgccggttgctgcgcgaacaccggccccgcgccatcgtcaatttc
gccgccgaatcgcatgtggaccgcgccatccgggcccccgacgccttcgtgcagaccaac
gtcgtgggcactttcaccctgctggaggccgcgcgcgcctattgcaccgaacaggacgcc
gctgcggcggcggccttccgcttcctgcatgtgtccaccgacgaggtgtacggatcgctg
gcgccccaggccgcccccttcaccgaaacccatccctaccagccgaacaacccgtattcg
gccagcaaggcggccagcgaccacatggtgcgctcgtaccgccacacctacgggctgccc
gccatcaccacgcactgctgcaacaactatggcccgcgccagttccccgagaagctgatc
ccgctggtgatccaccatgcgctggccggccgcgcgctgcccctgtatggcgacggcatg
cacgtgcgcgactggctctacgtggtcgaccattgcgcggcgctggaatgcgtgctgcgc
gacggccagccggggcagacctacaacatcggcgcgcactgcgagcgcaccaacctggaa
gtcgtgcacgcggtctgcgccctgctggaccaatggcgcgcccgcccggatgggcagccg
catgccggcggcatcgccttcattcccgaacggcccggccacgacaggcgctacgcgatc
gacgccggcaagatacagcgcgaactcggctggcgggccgcgacctcgttcgaggcgggc
ctgcgcgagacggtacgctggtacctggaccatccgcagtgggtggcggacatcgccagc
ggcgcgtatcgccactggctcgatacgcattacggcacatga
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