Bordetella pertussis CS: BPTD_0539
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Entry
BPTD_0539 CDS
T01846
Name
(GenBank) autotransporter
Organism
bpc
Bordetella pertussis CS
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
AC_1
DUF3575
Motif
Other DBs
NCBI-ProteinID:
AEE65999
LinkDB
All DBs
Position
555803..562525
Genome browser
AA seq
2240 aa
AA seq
DB search
MGSGPSGMNERVTVNQGARIETNASAAISVGTSGQVRIEGGAVVQSTVNTAASGQYAKTL
EAASNNNISIQVNAQLLAKGSASQSSALGLSGAGNTVTNHGTIRADNAAAIWVTANTANA
ANTIDNYGTIETVLNGGYANAIGSTRNNSATGAGVTVRNHANGRIVGNVKFEAGDDSVIL
DGGSTITGSLNGGSGNNSLTLKAGDGTLGRAIRNFGTITKQEAGTWTLNGQVGRNDNNLK
STVKVEGGTLVLRGDNSGATQGGVLQVSAGATADVTAASAMQSISNAGTVQFTQDSNAAY
AGVLSGTGSIVKRGGGDLTLTGNNTHTGKVVVEAGSLSVSAANNLGGAGSSVQLKGGALA
LKKTIVVNRGLTLDSGAQTLIIEPGTTTTWQGQVSGAGKLVTQGGTLVLEHASNTYSGGT
EINNGTLRAAHDASLGSGTLALKNSQLAATDSFTATRALTLAGNESIDVAATKILSWNGE
ISGAGTLVKEGQGTLLLRGTNQQNGGTTVNAGTLQISRDANLGRGALALNDGTLQSTGSF
ATSRAATLRGQATMEVDASHTVTWNGELSGGGMLRKSGQGTLVLAGANTYSGGTVVEAGA
LRAGHEDNLGRGAITLQGGDLLAGGSFSSNRDLTLVRGSLDVARDATLTWSGAISGAGDL
VKKGDGRLTLTGVNEYAGQTVLRGGKLRVARDENLGRGALVLEDNTVFESMGSHAATRQV
TLKGAPKVETLDGTTLEWRGTVDGDGKLYKQGGGTLVLSGNNTYAKGVEVWGGVVQVSRD
QNLGAANGAVTLNGGGLAANGDFTSNRQLELTAGAKAIDVAAGKDVTWRGVVNGAGALTK
AGDGTLALAGANTYTGGTRLQGGTVQVSRDNNLGQAAGAVTFDGGRLANTGSFATARTAT
LNKAGQIDTDRGTTLTWNGAIGGKGELRKQGAGTLVLGGANTYQGDTRVEAGTLQVSADA
NLGQGAVHLHDSRLATTGTFATSRRLELTGRGAVQAAAAATLDWRGTVAGAGTLVKEGAG
TLVLAGDNQHAGGTEVRAGTLQVSRATNLGPGALALENAALATTASFTATQAATLTGNAA
IDTAAGTTLGWEGAIGGTGSLHKKGEGKLVLVKDNHHDGGTTIHAGTLQVSRDANLGSGQ
SAVTLDGGALAVSAGFSSGREIVVGAGHGALSVTGGHTLQWQGQVGGAGALTKTGDGTLV
LEHDNTHAGGTRITGGVLRVSRDENLGEAHGMLTLDGGTLSTTAGFASRRNATVGNGGGR
IVVADAATLDLQGDVAGAGRLVKEGAGTLALGGTNTYAGGTVVEAGTLRVARDANLGGGA
LTLNNSRLHATAGFATGRDATLSGRASIDTDDRATLQWRGTVNGAGRLVKQGLGTLVLDG
DNRYAGGTEVNAGTLQVARDANLGAGDVALNGSSLAATASFATARTATLSGAAAIDTADG
ATLDWNGLLDGDGALVKQGNGTLALAAANRYGGGTIVKAGAVRIARDANLGRAGTGVTLD
GGALATTADLATGRAATLGAANGTLDVAAGTRLDWNGAIGGAGALTKTGAGTLALNHDNQ
HAGGTLVHGGTLRIARDANLGAAGTAVTLDGGTLATTASLAPERALRVGARNGVLLPDAG
TTLDWRGVVAGAGKLTKAGPGTLVLSADNRHGGGTAVTGGTLQVSRDANLGAAAGALTLD
GGTLLSTASFASARVATLDAAGGTFVTRDGTRLDWDGAIGGAGGLVKEGAGELRLGNANT
YQGPTRIAAGRLAVNGSIASPVTVEQAGVLGGTGRIVGDVANRGVVAPGNSIGALTVAGN
YAGTGGSLEVEAVLGGDAAPADRLVLDGGAASGVTPVVVKPQGGVGGLTLRGIPVVVAQG
GATTAPGAFRLAQPLVAGAYEYQLLRGAGDGAAAQAQDWYLRTSRVERDKAGRIVKVVPF
YRPEVALYAGTPMLMRMVGTEALGSYRERAGQPGAAAPEAGAAARRGVWARTFGRRFERS
AGSEAAPSFNGSLAGMQLGADLYTRRSATRHADAFGVFGGYATARGDVRGLARGEIQAVG
TSTLRAAQLGAYWTHTGPSGWYVDTVLAGTRYKQQTSSSAHVGATSRGWGMMASVEAGYP
WQLNPRWQIEPQAQLVYQQLGIANGADRVSSVSYKTPDALTGRLGTRLAGQYAYGKAQLR
PFMGVSLLHDFTGADTVTFAGVHSVRASRQNTAVDLKAGVDTQLGKSVGLWGQVGYGKSV
GSGDGSDRGWSANLGLRVAY
NT seq
6723 nt
NT seq
+upstream
nt +downstream
nt
gtgggcagtggaccgagcgggatgaacgaacgcgtcaccgtgaatcagggggcgcgcatc
gagacaaacgccagcgcggcgatcagtgtgggaacgagcgggcaggtacgaatcgagggc
ggtgcagtagtgcaaagcacggtcaatactgctgcgtccggccagtacgccaaaacgctg
gaagcagcaagcaataacaatatttccatccaagtaaacgcgcagctcctggccaagggc
agcgcttcgcagtccagcgcgttgggattgtcaggcgccggcaataccgtcaccaaccat
ggcacgatccgggccgataatgccgcggcaatctgggtcactgccaataccgccaatgcg
gccaataccatcgataactacgggactatcgaaacagtgctcaatggcggctacgccaac
gccatcggcagcacgcggaacaacagtgccacgggcgctggcgtgacggtacgcaatcat
gccaacggacgcatcgtcggcaacgtgaagttcgaggctggcgacgacagcgtcatactc
gacggcggctctaccatcaccggatccttgaacggtggcagcggcaacaacagcctgacg
ctgaaagccggcgacggcacgctgggccgcgcaatccgcaacttcggcacgatcaccaag
caggaggctggaacctggaccctgaatggccaggtcggccgcaacgacaacaacctcaag
tccacggtcaaggtggagggcggcacgctggtcttgcgcggcgataacagcggcgccacc
cagggcggcgtgttgcaggtgtccgccggcgctacggcggacgtaactgccgccagcgcc
atgcagtccatcagcaacgccggcacggttcagttcacgcaggacagcaatgccgcctac
gccggcgtgctgagcgggaccgggagcatcgtcaagcgcggcggcggcgacctgacgttg
acgggcaacaacacccataccggcaaggtggtggtggaggcgggcagcctcagcgtatcg
gcggccaacaacctgggtggcgcaggtagttcggtacagctcaagggcggcgccctcgcc
ctcaagaaaaccatcgtcgtcaatcgcggcctgacgctcgattccggggcgcagacgttg
atcatcgagccgggaacaaccacgacctggcaaggccaggttagcggcgccggcaaactg
gtgacccagggcggcacgctggtgctggagcacgcgtccaatacgtatagcggcggtacg
gagatcaacaacggaacgctgcgggcggcgcatgatgccagcctgggttccggcacgttg
gcgctcaagaacagccagctggccgccacggacagcttcacggccacgcgtgcattgacg
ctcgctggaaacgaaagcatagacgtcgcagccaccaagatactcagttggaacggcgaa
atcagcggcgccggcaccctggtgaaggaaggccaggggaccttgctgctgcgcggaacc
aatcagcaaaatggcggcacgaccgtcaatgccggtacgctgcagatatcccgcgacgcc
aatcttggccgaggggcgctggcgctgaacgacggcacgctgcagagcaccggcagcttc
gcgacctcgcgcgcggccaccttgcgcggccaggccaccatggaggtcgacgcttcgcat
accgtgacctggaatggcgagctgagcggcggcggcatgttgcgcaagtcaggccagggc
acgctggtcctggccggcgccaacacgtactcgggtggcacggtggtcgaggccggcgcg
cttcgggcaggacacgaagacaacctgggacggggcgcaataaccctgcagggcggagat
ctgcttgccggcggcagtttttcgagcaaccgcgatctcacgcttgtccgcggttccttg
gacgtggctcgcgacgctaccctgacctggagcggcgcgatatcgggcgccggcgatctg
gtcaagaaaggggacgggcgcctgacactcacgggcgtcaacgagtacgccggccagacc
gtgctccggggcggcaagctgcgtgtggccagggacgaaaacctgggccgcggagcactg
gtgctggaagacaataccgtgttcgagagcatgggctcgcatgccgccacgcggcaggtc
acgctcaagggcgcgcccaaggtagagacgcttgacggcactacgctcgaatggcgcggc
acggtcgacggcgacggcaagctgtacaagcaaggcggcggcacgctcgtgctgagcggc
aacaatacctacgccaagggcgtcgaggtctggggcggggtcgtgcaagtctctcgcgac
cagaacctgggcgcggccaatggcgcggtcacgctcaacggcggcgggttggcggccaac
ggggatttcaccagcaatcgccagctggagctgaccgccggggccaaggccatcgacgtc
gcggccggcaaggacgtgacgtggcgcggtgtcgtcaacggcgccggcgcgctgaccaag
gccggcgacggtacgctggcgctggccggcgccaacacctacaccggcggcacgcgcttg
cagggcggcaccgtgcaggtatcgcgcgacaacaacctcggccaggccgccggcgcggtc
acgttcgacggcgggcggctggccaacacgggcagctttgcgaccgcgcgcacggccacg
ctcaacaaggctggccagatcgataccgaccggggcaccacgctgacatggaacggcgcc
atcggcggcaagggcgagctgcgcaagcaaggggcgggcaccctggtgctgggcggagcc
aacacttaccagggcgacacccgcgtcgaggccggcacgctgcaagtgtcggccgacgcc
aatctgggccagggcgccgtgcatctgcacgacagccggctggcgacgaccggtacgttc
gcgacctcgcgccgtctggagttgaccggacgtggcgcggtgcaagcggctgccgccgcc
acgctggattggcgcgggacggtcgctggcgccggcacgctggtcaaggagggcgcaggc
acgctggtgctggccggtgacaaccagcatgccggcggcaccgaggtcagggccggcacg
ctgcaggtatcgcgcgccaccaacctggggcccggcgcgctggcgctggagaacgcggcg
ctggccacgaccgccagcttcacggccacgcaggcagccaccctgactggcaacgccgcc
atcgacacggccgccggcaccacgctgggatgggagggggccatcggcggaaccggcagc
ctgcacaaaaagggcgagggcaagctggtgctggtcaaggacaaccaccatgacggcggc
accacgatccacgccggtaccctgcaggtgtcgcgcgacgccaacctgggctcgggacag
agcgcggtgacgctggatggcggcgccctggcggtttctgccgggttctccagcgggcgc
gagatcgtcgtgggcgccgggcacggcgcgctttcggtgacgggcggccacaccctgcaa
tggcagggccaggtcggcggggcgggggcgttgaccaagacgggcgacggcacgctcgtg
ctggagcacgacaatacccacgccggcggtacccggattaccggcggggtgctgcgcgtc
tcgcgcgatgagaacctgggcgaggcgcatggcatgctgacgctcgacggcggcacgctg
tcgaccaccgccgggttcgcgagccggcgcaacgccaccgtgggcaacggcggcggccgg
atcgtcgtcgccgacgccgccacgctggatttgcagggcgacgttgccggcgcgggccgg
ctggtcaaagagggcgcgggcacgctggccttgggcggcacgaacacctatgccggcggc
accgtggtcgaggccggcacgctgcgggtcgcgcgcgacgccaacctgggcggcggcgcg
ctgaccctgaacaacagccgcctgcatgcgaccgccggctttgccaccggccgcgatgcg
accctctccgggcgcgcctcgatcgacaccgacgaccgggcgacgctgcaatggcgcggc
acggtcaatggcgccggcaggctggtcaagcagggcctgggcaccctggtactggacggc
gacaaccggtacgcgggaggcaccgaggtcaatgccggcacgctgcaggtcgcgcgcgac
gccaacctgggcgcgggcgacgtggcgctcaatggcagcagcctggccgcgaccgccagc
ttcgccaccgcgcgcacggccacgctgagcggcgcggccgccatcgacacggccgacggc
gccaccttggactggaatggcctgctcgacggtgacggcgccctggtcaagcagggcaac
ggcaccctggcgctggccgcggccaaccgctatggcggcggcaccatcgtcaaggcgggc
gccgtgcggatcgcccgcgacgccaacctggggcgggccggcaccggcgtaacgctggac
ggcggcgcgctggccaccacggcggatctcgcgaccggccgcgcggcgaccctgggcgcg
gccaacggcacgctggacgtggccgccggcacccgcctggactggaacggggcgatcggc
ggcgccggcgcgctgaccaagaccggcgccggcaccctggcgctcaaccacgacaaccag
catgccggcggcaccctggtccatggcggcacgctgcggatcgcccgcgacgccaacctg
ggcgcggcgggcacggcggtgacgctggacggcggcacgctggccaccacggcgtcgttg
gcgcccgagcgcgcgctgcgcgtcggggcgcgcaacggcgtattgctgccggacgcgggc
acgaccctggattggcggggcgtggtcgccggcgcgggcaagctgaccaaggccggtccg
ggcacgctggtgctcagcgccgataaccgccatggcggcggcacggcagtcaccggcggt
acgctgcaagtttcgcgcgacgccaacctgggcgcggcggccggcgccctgacgctggac
ggcggcaccttgctgagcaccgccagctttgcctcggcgcgtgtcgccaccctcgatgcc
gcgggcggcaccttcgtcacccgcgacggcacccggctggattgggacggcgcgataggc
ggggcgggtggcctggtcaaggaaggcgccggcgagctgcggcttggcaatgccaatacc
taccaggggccgacccgcatcgccgccggccgcctggccgtcaacggcagcatcgccagc
ccggtcacggtcgagcaggccggcgtgctgggcggcacgggccgcatcgtcggggatgtg
gccaaccgcggcgtggtcgcgccgggcaactcgatcggcgcgttgacggtggccggcaat
tacgctggtacgggcggcagcctggaagtggaggcggtgcttggcggcgacgccgcgccg
gccgatcggctggtgctcgacggcggcgcggccagcggcgtcacgccggtcgtagtcaag
ccgcagggcggggtgggcggcctgaccctgcgcggcattccggtggtcgtggcccagggt
ggcgccacgaccgcgcccggggccttccgcctggcgcagccgctggtcgcgggcgcctac
gagtaccagttgctgcgcggcgcgggcgacggcgccgcggcgcaggcgcaagactggtac
ctgcgtacctcccgcgtcgagcgcgacaaggcgggcaggatcgtcaaggtcgtgcccttc
taccggcccgaggtggcgctgtatgccggcacgcccatgctgatgcgcatggtcggcacg
gaagcgctgggcagctaccgcgaacgcgcgggccagcccggcgcggccgcgcccgaggca
ggcgccgcagcccggcgtggcgtgtgggcacgtaccttcgggcgtcgtttcgagcgctcc
gcgggcagcgaagcggcgccgtccttcaacggcagcctggccggcatgcagctgggcgcg
gacctctacacgcgtcgctcggccacccggcatgccgacgccttcggcgtgttcggcgga
tacgccacggcccgcggcgatgtgcggggcctggcgcgcggcgagatccaggcggtgggc
acgtccacgctgcgggccgcccagctgggcgcctactggacgcacactggtccgagcggc
tggtacgtcgacacggtgctggcgggcacgcgctacaagcagcagaccagctcgtcggcc
catgtcggcgcgaccagccgcggctggggcatgatggcctcggtggaggccggctacccg
tggcagctcaatccgcgctggcaaatcgagccgcaggcccagttggtgtatcagcagctt
ggcatcgccaatggcgccgaccgcgtgtcttcggtgtcgtacaagacgcccgatgcgctg
acggggcggctgggcacgcgcctggcgggccagtacgcatacgggaaggcgcagttgcgg
ccgttcatgggcgtatcgctgctgcacgatttcaccggcgccgacaccgtcacgttcgcg
ggcgtgcacagcgtacgcgccagccgccagaacacggccgtggatctgaaggcgggcgtg
gacacgcagctgggcaagagcgtaggcctgtgggggcaggtcggctacggcaagtcggtc
ggcagcggcgacggcagcgaccgtggctggagcgccaacctggggctgcgcgtggcgtat
tga
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