Bordetella pertussis CS: BPTD_0947
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Entry
BPTD_0947 CDS
T01846
Symbol
ihfB
Name
(GenBank) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
bpc
Bordetella pertussis CS
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpc03032
]
BPTD_0947 (ihfB)
03036 Chromosome and associated proteins [BR:
bpc03036
]
BPTD_0947 (ihfB)
03400 DNA repair and recombination proteins [BR:
bpc03400
]
BPTD_0947 (ihfB)
DNA replication proteins [BR:
bpc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BPTD_0947 (ihfB)
Chromosome and associated proteins [BR:
bpc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BPTD_0947 (ihfB)
DNA repair and recombination proteins [BR:
bpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BPTD_0947 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AEE66371
LinkDB
All DBs
Position
1014066..1014425
Genome browser
AA seq
119 aa
AA seq
DB search
MTKSELIAALAARYPQLAARDTDYAVKTMLDAMTQALASGQRIEIRGFGSFSLSQRSPRI
GRNPKSGEQVLVPGKQVPHFKAGKELREWVDLVGNDQGDDSSNGSSDPLQSVMDMHAMH
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagtcggagctgatcgccgcgctggcggcccgctatcctcagctggccgctcgc
gacaccgattacgctgtcaagaccatgctcgatgcaatgacccaggccctggcctcgggt
cagcgcatcgaaatccgcgggtttggcagcttttcgctgtcgcagcgctctccccgtatc
gggcgcaatccgaagtcgggcgaacaagtgctggtgcctggcaagcaggtgccgcacttc
aaggccggcaaggagctgcgcgagtgggtcgatctggttggcaacgatcagggcgacgac
tcgtccaacgggtcgtccgacccgctgcaatcggtcatggatatgcatgccatgcactga
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