Bordetella pertussis CS: BPTD_1016
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Entry
BPTD_1016 CDS
T01846
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
bpc
Bordetella pertussis CS
Pathway
bpc02020
Two-component system
bpc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BPTD_1016 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BPTD_1016 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpc03021
]
BPTD_1016 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bpc02035
]
BPTD_1016 (fliA)
Transcription machinery [BR:
bpc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPTD_1016 (fliA)
Bacterial motility proteins [BR:
bpc02035
]
Flagellar system
Flagellar assembly proteins
Stator
BPTD_1016 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
AEE66431
LinkDB
All DBs
Position
complement(1088358..1089095)
Genome browser
AA seq
245 aa
AA seq
DB search
MPNPEDSLVQYAPLVRKLALQLLARLPSSVQLDDLVQAGMIGLLDAVRRYQESPDAQFET
YATARIRGAMLDELRSQDWLPRSVRSKSRRIETAIQRKEQELMRAPSEGEIAEELGVPLA
EYQGMLADAQGVQILHYEDFNTDGDSDSPWAESSAEHADPLDALLAGDLRRALIDAIDGL
PEREKLLLSLCYEQGLNLKEIGAVLNVTEARVCQLRAQATARIRARLKEQAWARLPTAHH
LAQVV
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaccccgaagacagcctggtccaatatgccccgctggtgcgcaaactggcgcta
cagctcctggcgcgcctgccctccagcgtgcagctggacgacctggtgcaggccggcatg
atcggcctgctcgacgccgtgcggcgctaccaggaaagccctgacgcgcagttcgagacc
tacgccaccgcgcgcatccgcggcgccatgctcgacgagctgcgcagccaggactggctg
ccgcgcagcgtgcgcagcaagagccgccgcatcgaaaccgccatccagcgcaaggaacag
gaattgatgcgcgctcccagcgaaggcgagatcgccgaggagctgggcgtgccgctggcc
gagtaccagggcatgctggccgatgcgcaaggcgtgcagatcctgcactacgaagatttc
aataccgacggcgacagcgacagcccgtgggctgaaagcagcgccgaacatgccgatccg
ctcgacgccctgctcgccggcgacctgcgccgcgccctcatcgacgccatcgacggcctg
cccgaacgcgagaagctgctgctgtcgctgtgctacgaacaaggcctgaacctcaaggaa
atcggcgccgtgctcaacgtcaccgaggcgcgcgtgtgccaactgcgcgcccaggccacc
gcccgcatccgcgcccgcctcaaggagcaagcctgggcccgcctgcccaccgcccatcac
ctggcgcaggtggtatag
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