Bordetella pertussis CS: BPTD_1244
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Entry
BPTD_1244 CDS
T01846
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpc
Bordetella pertussis CS
Pathway
bpc03030
DNA replication
bpc03410
Base excision repair
bpc03420
Nucleotide excision repair
bpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPTD_1244 (polA)
03410 Base excision repair
BPTD_1244 (polA)
03420 Nucleotide excision repair
BPTD_1244 (polA)
03440 Homologous recombination
BPTD_1244 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpc03032
]
BPTD_1244 (polA)
03400 DNA repair and recombination proteins [BR:
bpc03400
]
BPTD_1244 (polA)
Enzymes [BR:
bpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPTD_1244 (polA)
DNA replication proteins [BR:
bpc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BPTD_1244 (polA)
DNA repair and recombination proteins [BR:
bpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BPTD_1244 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPTD_1244 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WD40_4
Motif
Other DBs
NCBI-ProteinID:
AEE66645
LinkDB
All DBs
Position
1343701..1346415
Genome browser
AA seq
904 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVQDHKAEYAVCVFDA
RGKTFRDDLFPDYKSHRPPMPEDLAAQIEPIHEAVRALGWPLLAIEGVEADDIIGTLARQ
ASAQGIDTIVSTGDKDLAQLVDPHVTLVNTMSGEVLDVAGVNSKFGVPPERIVDYLMLVG
DTVDNVPGVNKVGPKTAVKWLAEHGSIDALVAAADSVKGVAGNNLREAIPNFPLTRTLLT
VKCDCDLTGHVSDWEDLAWRERDAATLTALFDRYGFRTWLRELTGDQERLPTGDARAVPQ
AVAPAELDYRIITDWAAFDAWMALVEDAPLVALDTETTSLDEMQARLVGLSMAVKPGVAC
YIPVAHRGPEAGDQLPRDEVIARLRGWLEDAGRAKLLHHAKYDTHVFANEGVSLAGVAED
TMLQAYVLESHRGVGLNDLAQRFLGRSGVNYEDLCGKGAKQIGFDEVAVPLAGHYSCEDS
DFTLQLHEVLRPRVAEDEGLERTYLLELQVSRVLTVVERNGVKVDAQELGRQSHKLGQEM
LALEQRAYELAGQPFNLNSPKQLGEILFGRMGLPVVRKTAGGAPSTDEEVLSKLAQDYPL
PQVLLEYRGLSKLKSTYTDKLPRMISPATGRVHTHYSQAAVITGRLASSDPNLQNIPVRT
EAGRRVREAFIAEQGKLLSADYSQIELRIMAHVSDDANLQRAFAAGEDIHRATASEVFGV
PLAEVGAEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFTRYPGVARYMDD
TRRLARDQGYVETVFGRRLQLPDIRAASGPRRQGAERAAINAPMQGTAADLIKMAMVAVQ
DWLDAERLRTRMIMQVHDELVLEVPDEELAAVAEALPRLMCDVATLRVPLVAEVGMGTNW
EQAH
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttattgctggtagacggttcgagctacttgtaccgtgctttccacgcc
atgcccgacctgcgcaatgcgcagggcgaacccacgggtgcgctttatggcgtggtcaat
atgttgcgcaagctcgttcaggatcataaggcagagtatgccgtatgcgttttcgatgca
cgcggaaaaacattccgggacgatttgttccctgactacaagtcgcaccgcccgcccatg
ccggaagacctggcggcgcagatcgagccgatccacgaggccgtacgcgccctgggctgg
ccgctgctggccatcgaaggggtggaggcggacgacatcatcggcacgctggcgcggcag
gccagcgcgcaaggcatcgacaccatcgtctccacgggcgacaaggacctggcgcaactg
gtcgacccgcacgtcacgctggtcaacaccatgagcggcgaggtgctcgacgttgccggg
gtgaacagcaagttcggcgtgccgccggagcgcatcgtcgattacctgatgctggtcggc
gacacggtcgacaacgtgcccggcgtgaacaaggtcggacccaagacggccgtcaagtgg
ctggccgaacatggctccatcgacgcgctggtggccgccgccgacagcgtcaagggcgtg
gccggcaacaatctgcgcgaagccattccgaactttccgctcacgcgcacgctgctgacg
gtcaagtgcgactgcgacctgaccggccatgtgtcggactgggaagacctggcatggcgc
gagcgcgacgcggccaccttgaccgcgctgttcgaccgctacggttttcgcacctggctg
cgcgaactgacgggcgaccaggagcgcctgcccacgggagacgcgcgcgccgtgccgcag
gccgtcgcgccggccgagctggactaccgcatcatcaccgactgggccgccttcgatgcc
tggatggcgctggtggaggacgcgccgctggtggcgctggatacggaaaccacgtcgctc
gatgagatgcaggcgcggctggtgggcctgtcgatggcggtcaagccgggcgtggcctgc
tacatcccggtggcgcaccgtggccccgaggcgggcgatcaattgcccagggacgaggtc
atcgcgcgcctgcgcggctggctggaggacgccgggcgcgccaagctgctgcaccatgcc
aaatacgatacccatgtcttcgccaacgaaggcgtaagcctggcgggcgtggccgaggac
acgatgctgcaggcctatgtgctggagtcgcatcgcggcgtgggcctgaacgacctggcc
cagcggtttctcgggcgcagcggcgtgaactacgaagacctgtgcggcaagggcgccaag
cagatcggtttcgacgaggtggcggtccccctggcggggcattattcctgcgaggattcc
gatttcaccctgcagttgcacgaggtgctgcgcccgcgtgtggccgaggacgaagggctg
gagcgcacctacctgctggagctgcaggtctcgcgcgtgctgaccgtggtcgagcgcaac
ggtgtgaaggtcgatgcccaggagctggggcgccagagccacaagctgggccaggaaatg
ctggcgctggagcagcgcgcctacgagctggccggccagccgttcaacctgaactctccc
aagcaattgggcgagatcctgttcggccgcatggggctgccggtcgtgcgcaagaccgcg
ggcggcgccccctcgaccgacgaggaagtgctgtccaagctggcgcaggactatccgctg
ccgcaggtgctgctggaataccggggcctgtccaagctgaagtccacctataccgacaag
ctgccgcgcatgatcagcccggccaccggccgcgttcatacgcactattcgcaggcggcg
gtgatcaccggccggctggcgtcgtcggatcccaacctgcagaacatcccggtgcgcacc
gaggccggccggcgcgtgcgcgaggccttcatcgccgagcagggcaagctgctgtcggcc
gactactcgcagatcgagctgcgcatcatggcgcacgtctcggatgacgccaacctgcag
cgtgccttcgcggcgggcgaggatatccaccgcgcgaccgcctccgaggtgttcggcgtg
ccgctggccgaggtcggcgccgagcagcgccgcgccgccaaggcgatcaatttcggactg
atctacggcatgggcgtgttcgggctggcttccaacctgggcattacgcgcgacgccgcg
caggcctacatcgaccgctatttcacccgctatcccggcgtggcgcgctacatggacgac
acgcgccggctggcgcgcgaccagggctacgtcgagacggtattcggccgcaggctgcag
ctgccggacatccgcgccgcctccgggccgcgccgccagggcgccgagcgggccgccatc
aatgcgccgatgcagggtaccgccgccgacctgatcaagatggccatggtggcggtgcag
gactggctggacgccgagcgcctgcgcacccgcatgatcatgcaagtgcacgacgaactg
gtgctggaggtgcccgacgaggaactggcggcggtcgccgaagcgctgccgcggctgatg
tgcgacgtggccacgctgcgcgtgccgctggtggccgaggtgggcatgggcacgaactgg
gaacaggcgcactga
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