KEGG   Bordetella pertussis CS: BPTD_1992
Entry
BPTD_1992         CDS       T01846                                 
Name
(GenBank) putative exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bpc  Bordetella pertussis CS
Pathway
bpc03030  DNA replication
bpc03430  Mismatch repair
bpc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BPTD_1992
   03430 Mismatch repair
    BPTD_1992
   03440 Homologous recombination
    BPTD_1992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpc03032]
    BPTD_1992
   03400 DNA repair and recombination proteins [BR:bpc03400]
    BPTD_1992
Enzymes [BR:bpc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BPTD_1992
DNA replication proteins [BR:bpc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BPTD_1992
DNA repair and recombination proteins [BR:bpc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BPTD_1992
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AEE67308
LinkDB
Position
2161822..2162496
AA seq 224 aa
MPVGPAGRCFYCCFGINMAYFRRYTTPHPYGQTLRAGAAAGRASAARDGLRALDGPFVVA
DLETTGLSVATCEILEFAAVRVSACGQIEREFTQVVRTDGRVLPFISRLTGITQAEVERD
GVPVRQAFGDFLDFIEGGPLFFHNASFDRRFLQAAADRTGLPFEAQTHCTLMLARQAWPE
LPSHKLNVLARHLGASEPTHRALADVRTTVAVALAARARLAAQG
NT seq 675 nt   +upstreamnt  +downstreamnt
atgcccgttggacccgcagggcgttgtttttattgttgtttcggtatcaatatggcctat
ttccgtcgctacaccacgccccatccctatgggcagaccctgcgcgctggcgccgcggcc
ggccgcgccagcgccgcgcgcgacggcttgcgggcgctggatgggccgttcgtggtggcc
gacctggaaaccaccgggctgtccgttgccacgtgcgaaatcctcgaattcgccgccgtg
cgcgtcagcgcatgcgggcagatcgagcgcgagttcacccaggtggtgcgcaccgacggc
agggtgctgccgttcatttcgcgcctgaccggcatcacccaggccgaagtcgagcgcgat
ggcgtgccggtgcggcaggcgttcggcgacttcctcgacttcatcgagggcgggccgctg
tttttccataacgcttcgttcgatcgccgcttcctgcaggccgcggccgatcgcaccggc
ctgccgttcgaggcgcagacccattgcacgctgatgctggcgcgccaggcctggcccgag
ctgccgtcgcacaagctgaacgtgctggcccgccatctcggcgcgtccgagccgacccac
cgggccctggccgacgtgcgcaccaccgtggccgtggcgttggctgcgcgtgcgcggctg
gcggcgcagggctga

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