Bordetella pertussis CS: BPTD_1992
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Entry
BPTD_1992 CDS
T01846
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpc
Bordetella pertussis CS
Pathway
bpc03030
DNA replication
bpc03430
Mismatch repair
bpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPTD_1992
03430 Mismatch repair
BPTD_1992
03440 Homologous recombination
BPTD_1992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpc03032
]
BPTD_1992
03400 DNA repair and recombination proteins [BR:
bpc03400
]
BPTD_1992
Enzymes [BR:
bpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPTD_1992
DNA replication proteins [BR:
bpc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BPTD_1992
DNA repair and recombination proteins [BR:
bpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BPTD_1992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AEE67308
LinkDB
All DBs
Position
2161822..2162496
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AA seq
224 aa
AA seq
DB search
MPVGPAGRCFYCCFGINMAYFRRYTTPHPYGQTLRAGAAAGRASAARDGLRALDGPFVVA
DLETTGLSVATCEILEFAAVRVSACGQIEREFTQVVRTDGRVLPFISRLTGITQAEVERD
GVPVRQAFGDFLDFIEGGPLFFHNASFDRRFLQAAADRTGLPFEAQTHCTLMLARQAWPE
LPSHKLNVLARHLGASEPTHRALADVRTTVAVALAARARLAAQG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttggacccgcagggcgttgtttttattgttgtttcggtatcaatatggcctat
ttccgtcgctacaccacgccccatccctatgggcagaccctgcgcgctggcgccgcggcc
ggccgcgccagcgccgcgcgcgacggcttgcgggcgctggatgggccgttcgtggtggcc
gacctggaaaccaccgggctgtccgttgccacgtgcgaaatcctcgaattcgccgccgtg
cgcgtcagcgcatgcgggcagatcgagcgcgagttcacccaggtggtgcgcaccgacggc
agggtgctgccgttcatttcgcgcctgaccggcatcacccaggccgaagtcgagcgcgat
ggcgtgccggtgcggcaggcgttcggcgacttcctcgacttcatcgagggcgggccgctg
tttttccataacgcttcgttcgatcgccgcttcctgcaggccgcggccgatcgcaccggc
ctgccgttcgaggcgcagacccattgcacgctgatgctggcgcgccaggcctggcccgag
ctgccgtcgcacaagctgaacgtgctggcccgccatctcggcgcgtccgagccgacccac
cgggccctggccgacgtgcgcaccaccgtggccgtggcgttggctgcgcgtgcgcggctg
gcggcgcagggctga
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