Bordetella pertussis CS: BPTD_2718
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Entry
BPTD_2718 CDS
T01846
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bpc
Bordetella pertussis CS
Pathway
bpc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BPTD_2718 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpc03400
]
BPTD_2718 (xseA)
Enzymes [BR:
bpc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BPTD_2718 (xseA)
DNA repair and recombination proteins [BR:
bpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BPTD_2718 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEE67972
LinkDB
All DBs
Position
complement(2962698..2964089)
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AA seq
463 aa
AA seq
DB search
MTIGLSVTNDVFARDILTVAQLNQAVGQLLERSIPSLWVRGEISNFTQAASGHWYFTLKD
SRAAVRTVMFRSRAAQVGFVPRPGDQVEVRARVSLYEPRGDYQLQADGMRRAGVGNLYEA
FLRLKAQLQDEGLFDPQRKRQPARLPRAIGVVTSLHAAALRDVLSALARRAPQVPVIIYP
APVQGADAAARLAARVAQANQRAEVDTLLLVRGGGSIEDLWSFNDEALAREVAASDIPVI
SGVGHETDFTIVDFVADLRAPTPTAAAELACVPRGDLLAALRHTAEWLARAQQRRLDQAA
QRLDRAAAMLTSPAQRLAHQQERLNTLRHRLASAWRGPQGHRVARLDMLAQRLAHRRPDT
GRAAERSAALLAQLGRAQARLAAARQARLDTLAAQLRALDPQHTLARGYAIVRDAAGAIV
TDATRLAARDRIEIAVARGRIGADVTDIGTPDGTDGNPALRRG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgacaattggattgtcggtcacaaacgacgtattcgcgcgggatatcctgacagttgcc
cagttgaaccaggctgtgggccaattgctggagcgcagcatcccgtcgctgtgggtgcgc
ggcgagatttccaatttcacccaggcggcctcgggccactggtatttcacgctcaaggac
agccgtgccgcggtgcgcaccgtcatgttccgcagccgcgccgcccaggtggggttcgtg
ccgcgcccgggcgaccaggtcgaggtgcgcgcgcgcgtctccctgtacgaaccccgcggc
gactaccagttgcaggccgacggcatgcgccgcgccggcgtgggcaacctgtacgaggct
ttcctgcgcctgaaggcgcaactgcaggacgaagggctgttcgatccgcagcgcaagcgc
cagccggcgcggctgccgcgcgccatcggggtggtgacctcgctgcacgcggccgccttg
cgcgatgtgctgtcggcgctggcgcgccgcgcgccgcaggtgcccgtgatcatctacccg
gcgccggtgcagggcgccgacgcggccgcccggctggcggcgcgcgtcgcgcaggccaac
cagcgcgccgaggtcgatacgctgctgctggtgcgtggcggcggcagcatcgaggacttg
tggagtttcaacgacgaagcgctggcgcgcgaggtggccgccagcgacatcccggtgatc
agcggggtggggcacgagaccgacttcaccatcgtcgacttcgtggccgacctgcgcgcg
cccacgcccaccgccgccgccgagctggcctgcgtgccgcgcggcgatttgctggccgcg
ctgcgccacaccgccgagtggctggcgcgggcccagcagcgccggctcgaccaggccgcc
cagcgcctggaccgggccgccgccatgctgacttcgccggcgcaacgactggcgcaccag
caagaacgcctgaacacgctgcgccatcgcctggcctccgcatggcgcgggccgcagggg
caccgggtggcgcggctggacatgctggcccagcggctggcgcatcggcggcccgatacc
gggcgcgcagccgaacgcagcgccgcgctgctggcgcaactggggcgtgcgcaggcgcgc
ctggcggccgcccgccaggccaggctggacacgctggccgcgcaactgcgcgcgctcgat
ccgcagcatacgctggcgcgtggctatgccatcgtgcgcgacgccgccggggccatcgtt
accgacgccacgcgcctggccgcgcgcgaccggatcgagatcgccgtggcgcgcggccgg
atcggcgccgacgtcacggacatcgggacacccgatggcaccgacggtaaccctgcgttg
cggcggggttaa
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