Bordetella pertussis CS: BPTD_2921
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Entry
BPTD_2921 CDS
T01846
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpc
Bordetella pertussis CS
Pathway
bpc00260
Glycine, serine and threonine metabolism
bpc00460
Cyanoamino acid metabolism
bpc00630
Glyoxylate and dicarboxylate metabolism
bpc00670
One carbon pool by folate
bpc00680
Methane metabolism
bpc01100
Metabolic pathways
bpc01110
Biosynthesis of secondary metabolites
bpc01120
Microbial metabolism in diverse environments
bpc01200
Carbon metabolism
bpc01230
Biosynthesis of amino acids
bpc01240
Biosynthesis of cofactors
bpc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BPTD_2921 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BPTD_2921 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BPTD_2921 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BPTD_2921 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BPTD_2921 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BPTD_2921 (glyA)
Enzymes [BR:
bpc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BPTD_2921 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AEE68153
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Position
complement(3179559..3180806)
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AA seq
415 aa
AA seq
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MFNRNLTLDQVDPDVWAAIQKEDVRQEQHIELIASENYASPAVMQAQGTQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRLKQIFGAEAANVQPNSGSQANQGVYMAVLKPGDTVLGMS
LAEGGHLTHGASVNASGKLYNFVPYGLDADEVLDYAQVERLTKEHKPKLIVAGASAYALH
IDFERMARIAHDNGALFMVDIAHYAGLVAGGAYPNPVPHADFVTSTTHKSLRGPRGGVIM
MKAEFEKAVNSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFQDYAQQVVKNAKVLADTLV
KRGLRIVSGRTESHVMLVDLRPKGITGKEAEAVLGQAHITVNKNAIPNDPEKPFVTSGIR
LGTPAMTTRGFKEAEAELTANLIADVLDNPRDEANIAAVRARVNELTARLPVYGN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccgcaacctgaccctcgaccaggtggatcccgacgtctgggccgccatccag
aaagaagacgtacgccaggaacagcacatcgagctgatcgcgtccgagaactacgccagc
cccgccgtgatgcaggcccagggcacgcaactgaccaacaagtatgcggaaggctacccg
ggcaagcgctactacggcggttgcgagtacgtcgacgtggtcgagcagctggccatcgac
cgcctgaagcagattttcggcgccgaggccgccaacgtgcagccgaactccggctcgcag
gccaaccagggcgtgtacatggcggtgctcaagccgggcgataccgtgctgggcatgagc
ctggccgaaggcggtcacctgacgcacggcgcgtcggtcaacgcctcgggcaagctgtac
aacttcgtgccctacggcctggacgccgacgaggtgctggactacgcccaggtcgagcgg
ctgaccaaggaacacaagcccaagctgatcgtggccggcgcctccgcgtacgcgctgcac
atcgacttcgagcgcatggcgcgcatcgcccacgacaacggcgcgctgttcatggtggac
atcgcccactatgccggcctggtggccggcggcgcctatcccaacccggtgccgcacgcc
gatttcgtcacctccaccacgcacaagtcgctgcgcggcccgcgcggcggcgtcatcatg
atgaaggccgagttcgagaaggccgtcaattcggccatcttcccgggcatccagggcggt
ccgctgatgcacgtcatcgcggccaaggccgtggccttcaaggaagcgctgtcgcccgag
ttccaggattacgcccagcaggtcgtcaagaacgccaaggtgctggccgatacgctggtc
aagcgcggcctgcgcatcgtgtcgggcaggaccgaaagccacgtcatgctggtggacctg
cgtcccaagggcattaccggcaaggaagcggaagcggtgctgggccaggcccacatcacg
gtcaacaagaacgccattcccaacgacccggaaaagcccttcgtgaccagcggcatccgc
ctgggcactccggccatgaccacccgcggcttcaaggaggccgaggccgagctgaccgcc
aacctgatcgccgacgtgctggacaatccgcgcgacgaggcgaacatcgccgcggtgcgc
gcgcgggtcaatgaactgaccgcccgcctgcccgtctacggcaactga
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