Bordetella pertussis CS: BPTD_3020
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Entry
BPTD_3020 CDS
T01846
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpc
Bordetella pertussis CS
Pathway
bpc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BPTD_3020 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpc03400
]
BPTD_3020 (ung)
Enzymes [BR:
bpc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BPTD_3020 (ung)
DNA repair and recombination proteins [BR:
bpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BPTD_3020 (ung)
Prokaryotic type
BPTD_3020 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEE68247
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All DBs
Position
3295839..3296591
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AA seq
250 aa
AA seq
DB search
MPNDNRLAPAALAAQAAALPAAWRHVLEQPAVARAFASVLGHVEQRLAEGAVVYPAAPFR
ALDQLAPADVRVVILGQDPYHGPGQAQGLAFSVPDDCKCPPSLRNIFNEIAVDYPRPTRH
DLSAWTRQGVLLLNTSLTVEDGQPGSHAKRGWETVTDALIAEVARDPSPKVFLLWGAHAQ
AKQALVPADAGHLVLAANHPSPLSARRPPVPFVGCGHFRQTNAWLQQRGQKPVDWSGEQN
NASRQGEFAL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacgacaaccgcctcgcccccgccgcgctcgccgcccaggcggccgccctgccc
gccgcctggcgccacgtcctggaacaacccgccgtggcgcgcgccttcgcatccgttctc
ggacacgtcgaacaacgcctggccgagggcgccgtggtctacccggccgcgccctttcgc
gccctggaccagctcgccccggcggacgtgcgcgtcgtgatcctgggccaggacccttac
cacgggcccggccaggcccagggcctggccttttcggtgccggacgactgcaagtgcccg
cccagcctgcgcaacatcttcaacgagatcgcggtggactatccgcgcccgacgcgccat
gacctgtcggcctggacgcgccagggcgtgctgctgctcaatacctcgctgacggtggaa
gacggccagcccggctcgcatgccaagcgcggctgggaaaccgtcaccgacgccctgatc
gccgaggtggcacgcgacccgtcccccaaagtcttcctgctatggggcgcgcatgcgcag
gccaagcaggcgctggtgccggccgacgccgggcacctggtgctggcggccaaccacccg
tcgcccctgtcggcgcgccgccccccggtgccctttgtcggttgcggccatttccgccag
accaatgcgtggctgcaacaacgcggccagaaaccggtagattggtcgggtgagcaaaat
aatgcttcccgtcaaggggaattcgcgttatga
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