Bordetella pertussis CS: BPTD_3200
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Entry
BPTD_3200 CDS
T01846
Symbol
uvrA2
Name
(GenBank) putative excinuclease ABC subunit
KO
K03701
excinuclease ABC subunit A
Organism
bpc
Bordetella pertussis CS
Pathway
bpc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BPTD_3200 (uvrA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpc03400
]
BPTD_3200 (uvrA2)
DNA repair and recombination proteins [BR:
bpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPTD_3200 (uvrA2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BPTD_3200 (uvrA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
AAA_21
AAA_29
SMC_N
AAA_16
nSTAND1
RsgA_GTPase
AAA_25
AAA_18
UvrA_DNA-bind
Viral_helicase1
AAA_22
AAA_33
NACHT
nSTAND3
AAA_23
DUF4350
ATPase
AAA_15
DnaJ_CXXCXGXG
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AEE68406
LinkDB
All DBs
Position
3493651..3499368
Genome browser
AA seq
1905 aa
AA seq
DB search
MSSQIRIVGARQNNLKNLDLTIATGELVVVTGVSGSGKSSLAFDTLYAEGQRRYVETFSP
YARQFLDRMDKPQVDRIEGILPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARGARLY
CRGCGKQVRRDTPESVFHSLAGRAAALGDPRLVVTFPIAVPANFTEDEVRGFLDQQGYTR
VHAEEAASAAAPAPKARRGKSAKGAKDGAAPVARRILHVVQDRFRFAAAERERVMEALDT
ALRMGAGHLAVYAMGEEGGADQAVWKYSDRLHCADCDIEYTDPLPSSFSFNSPLGACEAC
RGFGRVIGIDIGLVIPDENKTLLEGAIKPWQTPSFKECQDDMVKYAPRAGIPLSVPWKSM
TPEQRGWVLHGDPDWKGGNQAWKTQWYGVHKFFAWLESKAYKMHVRVLLSKYRSYTPCPT
CHGARLKPDALLWRLGSRAEADAVLPPGEGRYQRFMPAGTSWSRPQLEALDGLSVHDVMQ
LPIERVRRFFDGLRFEGVLDAAADLLMTEVRARLKFLCDVGLGYLTLDRQSRTLSGGEVQ
RINLTTALGTSLVNTLFVLDEPSIGLHPRDMHRVVEVMHRLRDAGNTLVVVEHDPQVMVA
ADRIIDIGPGPGERGGRIVFDGSPAQLRAANTLTGDYLGGRQRVEAPRPMPVANNTPRLI
LEGATAHNLNNVSIELPLGRLVCVTGVSGSGKSTLVQDVLYPALLKQKGKPSEAPGAFDR
LLGAEQIADVVMVDQTPIGKTARSNPASYVGAFDAIRKLYAQAALSKERGYTAGTFSFNS
GDGRCPTCGGTGFEHVEMQFLSDVYLRCPDCDGKRFRPEVLEVRVEHLGKSASIDQVLEM
TVSEALEFFKGLRDVQTGLAPLADVGLEYVRLGQPVPTLSGGEAQRLKLAGHLAEAARSG
ISTAKVAKKGSLFLFDEPTTGLHFDDVARLMRAFRKLLAAGHTLLVIEHNLDVIRAADWL
IDLGPEGGDAGGEVVGVGTPQDLMANDRSHTGLALRDYEGSILPVAPVSALAEPAAAYGE
EAGTPLQSLMRRRRQAAQSIEIRNAREHNLKNVNVEIPRDKFTVITGVSGSGKSTLAFDI
LFNEGQRRYLESLNAYARAIVQPAGKPDVDAIFGIPPTVAIEQRTSRGGRKSTVATMTEI
HHFLRLLYVKLGTQYCPDCKVAVEPQNADQIVARLLREHKGQHIGVLAPLVTARKGYYTD
LAKWAGSKGHTHLRVDGAFIPVSPWPRLDRYKEHTIELPVADVVVDPGNEAALRDAVRQA
LEHGQGVLSVVYPLDRLRAGLDGDLQQQHFSVKRACPSCGISFPEPDPRLFSYNSKHGWC
GGCFGTGLQLQGFDAEQTGEETAWNAWYEGEARTCTVCHGQRLNRVALAVRWRDRSIAEL
AALPVSDAHTFFTGLVTRGREGEIARDILAEIRGRLNFMQEVGLSYLALDRAAPTLSGGE
AQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNRILLDALARLEGNGNTLVVVEHDDDTI
RRASHIIDIGPGAGIRGGRVVAQGSAQDLIDAPESVTGRYLAKPLAHPLNGRRAVTADTP
MIRVHGARLHNLRSVDASIPIGRLSVVTGVSGSGKSTLAREVLLDNLVQAVSQGKAPGWS
GCERITGWEVIDRVLEVDQTPIGKTPRSCPATYVGFWDDVRKQFADTREARMRGWTAARF
SFNTGDGRCPICEGQGMRTIEMSFLPDVKVPCDACNGARFSSDTLSVQMRGKNAGELLAM
EVDDAIGYFAAHPKIHRPLQLMQDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKARLTE
GVITTGRASRAPHTLYVLDEPTVGLSMADVEKLIHVLHRLVEAGNTVVVIEHNLDVIAEA
DWLLDLGPEGGSGGGQLVAEGSPEHVVSLRERSHTGRVLSEFLQQ
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccagatccgcatcgttggcgcccgccagaacaatctcaagaacctcgacctg
accatcgccaccggcgaactcgtggtggtaaccggggtgtccggctcgggcaaaagctcg
ctggccttcgacaccctgtatgccgaaggacaacgccgctacgtcgagaccttctcgccc
tacgcgcgccagttcctcgaccgcatggacaagccgcaggtcgaccgcatcgaaggcatc
ctgccggcgatcgccatcgaccagaccaacccggtgcgcagctcgcgcagcacggtcggc
accatgaccgagctcaacgatcacctgaagctgctgttcgcgcgcggcgcgcggctgtac
tgtcgcggctgcggcaagcaggtgcggcgcgatacacccgagtcggtgttccattcgctg
gccgggcgcgcggccgcgctgggagatccgcgcctggtggtgaccttccccatcgcggtg
ccggccaatttcaccgaggacgaggtgcgcggcttcctcgaccagcagggctacacgcgc
gtgcatgccgaggaagccgccagcgccgccgcgcccgcgcccaaggcgcgccgcggcaaa
agcgccaagggcgccaaggacggcgccgcgccggtcgcgcgccgcatcctgcacgtcgtg
caggaccgcttccgctttgccgcagccgagcgcgagcgcgtcatggaggcgctggatacc
gcgctgcgcatgggcgcgggccatctggcggtgtacgccatgggcgaggaaggcggcgcc
gaccaggcggtctggaaatacagcgaccggctgcactgcgccgactgcgacatcgaatac
accgatccgctgcccagcagcttctcgttcaactcgccgctgggcgcctgcgaagcctgc
cgcggcttcgggcgggtgatcggcatcgacatcgggctggtgattcccgacgagaacaag
accttgctggaaggcgcgatcaagccgtggcagacgccttcgttcaaggaatgccaggac
gacatggtcaagtacgcgccgcgcgccggcatcccgctgtcggtgccatggaaatccatg
acgcccgaacagcgcggctgggtgctgcacggcgaccccgactggaaaggcggcaaccag
gcctggaagacgcagtggtacggcgtgcacaagttcttcgcgtggctggagagcaaggcc
tacaagatgcatgtgcgggtgctgctgtcgaaataccgtagctataccccctgccccacc
tgccacggcgcgcgcctgaaacccgacgccctgctgtggcgcctgggcagccgcgccgag
gccgatgcggtgctgccgccaggcgaaggccgctaccagcgcttcatgccggccggcacc
agctggagccggccgcagctcgaggcgctggacggcctgtccgtccacgatgtgatgcag
ctgcccatcgaacgcgtgcgccgcttcttcgacggcctgcgcttcgagggcgtgctggac
gccgcggccgacctgctgatgaccgaagtgcgcgcgcgcctgaagttcctgtgcgacgtc
gggctgggctatctcacgctggaccgccagagccgtacgctgtcgggcggcgaagtgcag
cgcatcaacctcaccacggcgctgggcacctcgctggtcaacacgctgttcgtgctggac
gagccctcgatcggcctgcatccgcgcgacatgcatcgcgtggtcgaggtcatgcaccgc
ctgcgcgacgccggcaacacgctggtggtggtcgagcacgacccgcaggtcatggtggcc
gccgaccgcatcatcgatatcggccccggccccggcgagcgcggcggacgcatcgtgttc
gacggatcgccggcacagctgcgcgccgccaataccctgaccggcgattacctgggcggg
cgccagcgcgtggaggccccccggcccatgccggtggccaacaatacgccgcggctcatc
ctcgaaggcgccaccgcgcacaacctgaacaacgtgtcgatcgaactgccgctgggccga
ctggtgtgcgtcacgggcgtgtccggctcgggcaaatcgacgctggtgcaggacgtgctc
taccccgccctgctcaagcagaagggcaagccgtccgaagcgcccggcgcgttcgatcgc
ctgctgggcgccgagcagatcgccgacgtggtgatggtggaccagacgcccatcggcaag
acggcgcgctccaacccggccagctacgtcggcgcattcgacgcgatccgcaagctgtac
gcccaggcggcgctgtccaaggagcgcggctacaccgccggcaccttcagcttcaacagc
ggcgacggacgctgcccgacctgcggcggcaccggtttcgagcacgtcgaaatgcagttc
ctgtccgacgtctacctgcgctgccccgattgcgacggcaagcggttccgccccgaagtg
ctggaggtgcgcgtcgagcacctgggcaagagcgcctcgatcgaccaggtgctggaaatg
acggtcagcgaggcgctggaattcttcaagggactgcgcgacgtgcagaccggcctggcg
ccgctggccgacgtgggcctggagtacgtgcggctgggccagcccgtgcccacgctgtcg
ggcggcgaggcgcagcggctcaagctggccggccacctggccgaggcggcgcgcagcggc
atctccaccgccaaggttgccaagaagggcagcctgttcctgttcgacgagcccaccacc
ggcctgcacttcgacgacgtggcgcgcctgatgcgcgccttccgcaagctgctggccgcc
ggccatacgctgctggtgatcgaacacaacctggacgtcatccgcgccgccgactggctg
atcgacctgggcccggaaggcggcgacgccggcggcgaagtggtgggcgtgggcacgccg
caggacctgatggccaatgaccgctcgcataccggcctggcgctgcgcgactacgaaggc
agcatcctgcccgtggcgccggtcagcgcgctggccgagccggccgccgcctatggcgag
gaagccggcacgccgctgcaatcgctgatgcgccggcgccgccaggcggcccagtccatc
gagatccgcaacgcgcgcgagcacaacctgaagaacgtcaacgtcgagatcccgcgcgac
aagttcacggtcatcacgggcgtgtccgggtcgggcaagtcgaccctggccttcgacatc
ctgttcaacgaaggccagcggcgctacctcgaatcgctcaacgcctatgcgcgcgccatc
gtgcagcctgccggcaagcccgacgtggacgccatcttcggcatcccgcccaccgtggcg
atcgaacagcgcaccagccgcggcggacgcaagtcgaccgtggccaccatgacggaaatc
catcacttcctgcgcctgctgtacgtcaagctgggcacccagtactgccccgattgcaag
gtggcggtcgagccgcagaacgccgaccagatcgtggcgcgcctgctgcgcgaacacaag
ggccagcacatcggcgtgctggcgccgctggtgacggcgcgcaagggctactacaccgac
ctggccaaatgggcaggcagcaagggccacacccatctgcgcgtcgacggcgccttcatc
ccggtcagcccctggccgcgcctggaccgctataaggaacacaccatcgaactgccggtg
gccgatgtggtggtcgaccccggcaacgaagcggcgctgcgcgatgccgtgcggcaggcc
ctggagcatgggcagggcgtgctgagcgtggtgtacccgctggaccggctgcgcgcaggc
ctggatggcgatctgcaacagcagcacttctcggtcaagcgcgcctgcccgtcgtgcggc
atcagcttccccgagcccgatccgcgcctgttctcgtacaactccaagcacggctggtgc
ggcggctgcttcggcaccggcctgcagctgcagggcttcgacgccgaacagaccggcgag
gaaaccgcctggaacgcctggtacgaaggcgaagccaggacctgcacggtatgccatggc
cagcgcctgaaccgcgtcgcgctggcggtgcgctggcgcgaccgctcgatcgccgagctg
gcggcgctgcccgtctccgacgcccataccttcttcaccggcctggtcacgcgcggccgc
gaaggcgagatcgcgcgcgacatcctggcggaaatccgcggccggctcaatttcatgcag
gaggtcgggctgagttatctggcgctggaccgcgccgcgcccacgctctcgggcggcgag
gcgcagcgcatccggctggccgcgcaactgggctccaacctgcagggcgtgtgctacgtg
ctggacgaacccaccatcggcctgcatccgcgcgacaaccgcatcctgctcgacgcgctg
gcgcgcctggaaggcaatggcaacaccctggtggtggtggaacacgacgacgacaccatc
cggcgcgcctcgcacatcatcgatatcggcccaggcgcgggtatccgcggcggccgtgtg
gtggcgcagggcagcgcgcaggacctgatcgacgcccccgagtcggtcaccggccgctac
ctggccaagccgctggcgcacccgctcaacggccgccgcgccgtcaccgcggacacgccc
atgatccgcgtgcacggcgcgcgcctgcacaacctgcgcagcgtggacgccagcattccg
atcgggcgcctgagcgtggtgaccggcgtgtccggttcgggcaaatccaccctggcgcgc
gaagtgctgctggacaacctggtccaggccgtgtcgcagggcaaggcgccgggctggagc
ggctgcgaacgcatcaccggctgggaggtcatcgatcgcgtgctcgaggtcgaccagacc
cccatcggcaaaacgccgcgctcgtgtcccgccacctatgtcgggttctgggacgatgtg
cgcaagcaattcgccgatacgcgcgaggcgcgcatgcgcggctggaccgcggcgcgcttc
tcgttcaatactggcgacggccgctgcccgatctgcgagggccagggcatgcgcaccatc
gaaatgagtttcctgcccgatgtgaaggtgccctgcgacgcatgcaacggcgcgcgcttc
agcagcgataccctgagcgtgcagatgcgcggcaagaacgccggcgaactgctggccatg
gaagtggacgacgccatcggctacttcgccgcgcatccgaaaatccaccgtccgctgcaa
ttgatgcaggacgtcggcctgggctacctgacgctgggccagccctcgcccacgctctcc
ggcggcgaggcgcaacgcatcaagctggtcacggagctgtcgaaggcgcgcctgaccgaa
ggcgtcatcaccaccgggcgcgcctcgcgcgcgccgcacacgctgtatgtgctggacgaa
cccacggtgggcctgtcgatggccgatgtggagaagctgatccatgtgctgcaccggctg
gtcgaagccggcaataccgtggtggtgatcgaacacaacctggacgtgatcgccgaagcc
gactggctgctcgacctggggcccgaagggggcagcggcggcggccaattggtggccgag
ggttcgcccgaacacgtggtaagtttgcgcgagcgttcgcacaccgggcgcgtactcagt
gagttcctgcagcagtag
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integrated database retrieval system
