Bordetella pertussis CS: BPTD_3348
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Entry
BPTD_3348 CDS
T01846
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bpc
Bordetella pertussis CS
Pathway
bpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BPTD_3348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpc03019
]
BPTD_3348
Enzymes [BR:
bpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BPTD_3348
Messenger RNA biogenesis [BR:
bpc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BPTD_3348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEE68538
LinkDB
All DBs
Position
complement(3643951..3645384)
Genome browser
AA seq
477 aa
AA seq
DB search
MTESTSSDAPVTDAPTRTFADFGLHPLLLKLIADTGYTNPTPIQAQAIPVVVEGRDVMGA
AQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTPTRELADQVYESVKRYSLHT
PLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQKNVNLSQVGILVLDEADRML
DMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNATADTVTQ
IAYQMHGDTKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIHGDKTQG
DRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGAS
GEAIALFTADEERYLLDIEKLIKRQVPRGKLELPADLVARSHGRDRDAPRERGADRHRGE
RCTSGAAAPRQPVDELFYKPYEPANGQPASPETPEQEGRSNAPKRQLAVLLGGSRKG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatctacctcctccgacgcgcctgttaccgacgcgcctacgcgcactttcgca
gacttcggcctgcatccgttactgctcaagttgattgccgacaccggctatacgaatccc
acgccgattcaggcgcaggcgattccggtcgtagtggaaggccgcgatgtgatgggcgcc
gcccagaccggcaccggcaagacggcggcattcacgctgccgatcctgcatcgcctgatg
ccgctggccaataccagcgcatcgccggcgcgccacccggtgcgggccctcattctcacg
cccacgcgggaactggccgaccaggtttacgaaagcgtcaagcgctacagcctgcatacg
ccgctgcgcagcgccgtggtgttcggcggcgtggacatcggtccgcagaaggaagccctg
cggcgcggttgcgaagtcctggtggccacgccggggcgcctgctcgatcacgtcgagcag
aagaacgtcaacctcagccaggtcggcatcctggtgctcgacgaggccgaccgcatgctc
gacatgggctttctgcccgatctcgaacgcatcatccgcctgttgccggcgcagcgccag
gggctgctgttctcggccacgttcagcaatgaaatccgcaagctgggccgttcgtacctg
aaccacccggtggagatcgaagtcgccgcgcgcaacgccacggccgacaccgtcacgcag
atcgcctaccagatgcatggcgataccaagcgggcggcggtggtgcacctggtcaagtcg
cgcggcctgaagcaggtcatcgtgttttccaacaccaagatcggcaccgcgaggctggcg
cgccagctcgagcgtgacggcgtgaaggccgagtcgatccacggcgacaagacccagggc
gaccgcatgaaggcgctcgaggcgttcaaggccggcgatctggaagtgctggtggcgacc
gacgtcgcggcgcgcggcctggacgtggccggcgtgccctgcgtcatcaactacgacctg
ccgtacaacgccgaagactatgtccaccggatcggccgcaccggccgcgccggcgcgtcg
ggcgaggcgatcgccctgttcaccgccgacgaagagcgctatctgctcgacatcgagaag
ctgatcaagcgccaggtgccgcgcggcaagctggaactgccggccgacctggttgcgcgc
agccatggccgcgaccgcgacgccccgcgcgagcgtggcgccgaccgccaccgcggcgaa
cgctgcacttcaggcgcggccgcgccgcgccagccggtcgacgaactcttctacaagcct
tacgagcctgccaacggccagccggcctcgcccgagacgcccgagcaggaagggcgcagc
aacgcgcccaagcgccaactggcagtgctgctgggcggcagccgcaagggctga
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