Burkholderia pseudomallei 668: BURPS668_1386
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Entry
BURPS668_1386 CDS
T00481
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bpd
Burkholderia pseudomallei 668
Pathway
bpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BURPS668_1386 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpd03400
]
BURPS668_1386 (recB)
Enzymes [BR:
bpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BURPS668_1386 (recB)
DNA repair and recombination proteins [BR:
bpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BURPS668_1386 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
DUF374
Motif
Other DBs
NCBI-ProteinID:
ABN84298
LinkDB
All DBs
Position
I:1354193..1357984
Genome browser
AA seq
1263 aa
AA seq
DB search
MSHVAPSGPSASELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVV
TFTKAATAELHERIRARLAQLAHALDTGDDGGDPFIARLFETTLAPERGLDPQTAAKRVR
RALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDGALRFELAADFWRTRVEPV
AAAYPAFAEWLVEYGAGPAALDAQLARRLKKPLARLRWDGLHAADDGAESAARAHFDTAA
AIWRDERGVLGTLLADAQPSLNQRSHKPEAVSEALDAWARYFEQASAVAALPRAALKLTQ
SALEKATKKGGATPRHAFFDVAQALEAAVAALEAAQRARWLSLVEQWLDAAPAELAQRKR
TRRVVSFDDLLANLYRALDAHPWLRETLRARYPAALIDEFQDTDPLQFAIFDTIFAPAGP
LFLVGDPKQAIYSFRAADLHTYLAARARASARYTLAVNQRSTPAIVDACNRVFGANPRAF
VLDGLDYEPVRAGSRVRAPLLDATDPLAGAGDFRIWTLPAGDDVLTKRDAQRHAAHACAA
EIARLMRGAREHAVTLGGEPLAASGIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFA
TIDAEQLERVLAAIDAPGDLRRLRSALASDWFGLDAAALWRLEQGDAEQDGIDAAARGAR
AASAGAPAPSPADADAMGWVERFSRYRLLWRERGFAVMWRTLAGELRIAERLMAGADGER
RVTDVNHLAELTQARASAQPGIAPTLRWLAAQRLEGGGDDAQLRLESDRNLVQIVTVHKS
KGLEYAIVFCPFLNDGGLREPAGSGLPDAREYHDESGCAVLHYGCDDEAAERASREAVRE
QAAERARLVYVALTRAVYRCYLVAGTYQSSRSTKEARRSVLNWLVAGAGRDFDAWLKEPP
EDAELAERWQALAGGPVTLGALPVPAHREPLAAGHDAQATRAARRATRGLRDAWRIASFS
SLASAIARDESGIARAADDELRPDHDALAAALGADALEPPDAAAAIAPAPAAAPRELAED
DILAFPRGAAAGECLHRLLELSNFADASTWPPAALRALHERPVEAELALAERLPAMMTRL
VADLAATELVPGMRLAALDPARRLTEMEFLFPAPALDFNALRRLLAAHGYPDVALEAGTL
AGFVKGFIDMIVEHDGRFWIVDWKSNHLGTTPEAYGERALDAAMAHHAYHLQALLYMVAL
HRYLRVRMRGYDYDAHIAGYLYVFVRGVRPDWRNGGASAGVHARRPARALIEALDALMRE
GDA
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgtcgcgccatccggcccgtcggcgagcgagctcgacgtgttcgcgtgtccg
ctcgacggtgtgaaccagatcgaggcgtccgcgggcaccggcaagacctggaacatctgc
gcgctgtacgtgcgcctgctgctcgaaaaggatctcggcgcggacgagattctcgtcgtc
acgttcacgaaggcggcgacggccgagctgcacgaacggattcgcgcgcgcctcgcgcag
ctcgcgcacgcgctcgacacgggcgacgacggcggtgatccgttcatcgcgcgcctgttc
gagacgacgctcgcgcccgagcgcgggctcgatccgcaaacggcggcgaagcgcgtgcgt
cgcgcgctgcgcgcattcgaccaggcggcgatccacacgatccacgcgttctgccagcgg
gcgctgcaggaagcgccgttcgcggcggcgatgccgttcgcgttcgagatggaagcggac
gacggcgcgctgcgcttcgagctggccgccgatttctggcgcacgcgtgtcgagcccgtc
gcggcggcctatccggcgttcgccgagtggctcgtcgagtacggcgcggggccggcggcg
ctcgacgcgcagctcgcgcggcggctgaagaagccgctggcgcgactgcgctgggacggc
ttgcacgcggccgacgacggcgcggaaagcgccgcgcgcgcgcacttcgatacggcggcc
gcgatctggcgcgacgagcgcggcgtgcttggcacgctgctcgccgacgcgcagccgtcg
ttgaaccagcgctcgcacaagccggaggcggtgagcgaggcgctcgacgcgtgggcgcgt
tatttcgagcaggcgagtgcggtggccgcgttgccgcgcgcggcgctcaagctcacgcag
tccgcgctcgagaaagcgacgaaaaagggcggcgcgacgccgcgccacgcgttcttcgac
gtcgcgcaggcgctcgaggcggctgttgccgcgctcgaggccgcgcagcgcgcgcgctgg
ctgtcgctcgtcgagcaatggctcgacgcggcgcccgccgagctcgcacagcgcaagcgc
acgcgccgcgtcgtatcgttcgacgatctgctcgcgaacctgtatcgcgcgctcgacgcg
catccgtggttgcgcgagacgctgcgcgcgcgctatccggccgcgctcatcgacgaattc
caggatacggacccgctgcagttcgcgatcttcgatacgatcttcgcgcccgccggcccg
ctctttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggcggacctgcac
acgtatctcgccgcgcgcgcgcgggcgtccgcgcgctacacgctcgcggtgaaccagcgc
tcgacgcccgcgatcgtcgatgcgtgcaaccgcgtgttcggcgcgaacccgcgcgcgttc
gtgctcgacgggctcgattacgaaccggtgcgcgcgggctcgcgcgtgcgcgcgccgctt
ctcgacgcgaccgatccgcttgccggcgcgggcgacttccgcatatggacgctgcccgcc
ggcgacgacgtgctgaccaagcgcgacgcgcagcggcacgccgcgcatgcatgcgcggcg
gaaatcgcgcggctgatgcggggcgcgcgcgagcacgcggtgacgctcggcggcgagccg
ctcgcggcgtccggcatcgcggtgctcgtgcagacgcaccggcagggcagtctcgtgaag
cgcgtgctggccgcatggggaatcggcagcgtcgagctcgcccaggcgtcggtattcgca
acgatcgatgccgagcagctcgagcgcgtgctggccgccatcgacgcgccgggcgacctg
cggcgcctgcgctcggcgctcgcgtccgactggttcgggctcgatgcggcggcgctctgg
cgcctcgagcagggcgatgccgagcaggacggcatcgacgccgccgcccgcggcgcgcgc
gccgcatcggcgggcgcgcccgcgccgtcgcccgcggacgctgatgcgatgggctgggtc
gagcgcttctcgcgctaccggctgctgtggcgcgagcgcggcttcgcggtgatgtggcgc
acgctcgccggcgagctgcgcatcgccgagcggctgatggcgggggcggacggcgagcgg
cgcgtgaccgacgtcaatcacctcgccgagctgacgcaggcgcgcgcgtccgcgcagccg
ggcatcgcgccgacgctgcgctggcttgccgcgcagcgcctcgaaggcggtggggacgac
gcgcagttgcggctcgaatccgaccgtaacctcgtgcagatcgtcaccgttcacaagtcg
aaggggctcgaatacgcgatcgtgttctgtccgttcctgaacgacggcgggctgcgcgag
ccggccggctccggcctgcccgacgcgcgcgagtaccacgacgaatcgggctgcgcggtg
ctgcattacggctgcgacgacgaagcggccgagcgcgcgtcgcgcgaggcggtgcgcgag
caggcggccgagcgcgcgcggctcgtctacgtcgcgctcacgcgcgccgtctatcggtgc
tatctggtcgcgggcacctatcagtcgtcgcgttcgacgaaggaggcgcggcgcagcgtg
ctgaactggcttgtcgcgggcgcgggccgcgatttcgatgcgtggctgaaggagccgccc
gaagacgcggagctcgccgagcgctggcaggcgctcgcgggcggcccggtgacgctcggc
gcgctgccggtgcccgcgcatcgcgagccgctcgcggccgggcacgatgcgcaggcgacg
cgagccgcgcgacgtgcgacgcgtggcttgcgcgacgcatggcggatcgcgagcttcagc
tcgctcgcatcggcgatcgcgcgcgatgagagcggcatcgcgcgcgcggccgacgacgag
ctgcgccccgatcatgacgcgcttgccgccgcgctcggcgcggacgcgctcgagccgccg
gacgcggccgccgcgatcgcgccggcgcccgccgccgcgccgcgcgagctcgccgaagac
gacatcctcgcgttcccgcgcggcgcggcggcgggcgaatgcctgcaccggctgctcgag
ctgagcaatttcgccgatgcgtcgacgtggccgcccgccgcgctgcgcgcgctgcacgag
cgcccggtcgaggcggagctcgcgctggccgagcggctgcccgcgatgatgacgcggctc
gtcgccgatctcgcggcgacggagctcgtgccgggcatgcgcctcgcggcactcgatccg
gcgcggcggctcacggaaatggagttcctgtttcccgcgcccgcgctcgatttcaacgca
ttgcggcgcttgctcgccgcgcacggctatccggacgtcgcgctcgaagcgggcacgctg
gccggattcgtcaaaggattcatcgacatgatcgtcgagcacgacggccgcttctggatc
gtcgactggaaatcgaatcatctcggcacgacgcccgaagcatacggcgagcgggcgctc
gacgccgcgatggcgcatcacgcgtatcacctgcaggcgctgctctatatggtcgcgctg
catcgctatctgcgcgtgcgcatgcgtggctacgactacgacgcgcacatcgcgggctat
ctgtacgtgttcgtgcgcggcgtgcgtcccgattggcgaaatggcggcgcgagcgccggc
gtgcatgcgcggcggcccgcacgcgcgctgatcgaggcgctcgacgcgctgatgcgcgag
ggggatgcatga
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