Burkholderia pseudomallei 668: BURPS668_A2525
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Entry
BURPS668_A2525 CDS
T00481
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bpd
Burkholderia pseudomallei 668
Pathway
bpd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BURPS668_A2525 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpd03021
]
BURPS668_A2525 (rpoD)
Transcription machinery [BR:
bpd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BURPS668_A2525 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ABN86438
LinkDB
All DBs
Position
II:complement(2436729..2438939)
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AA seq
736 aa
AA seq
DB search
MRSEAKAAKPASPRASAKSARGAAAAPDETAATRASTVQPAVVQQPRVDLAGTANSMTKK
LNEVSVDDDANQSDDQPTAASGKGEKAKARDRRAKEKALLKEAFATSTPGTAEELEERRT
KLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAETLLL
NDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRI
EDGLRHMVMAISACPTTIADILAMAERVANEESRVDELVDGLIDPNAADTDGFSEKDAEE
IENEDAEAEEDDEEEEEDDDGAAQATANAAQLEALKRASLEKFALISEWFDKMRRAFEKE
GYKSKSYLKAQETIQNELMSIRFTARTVERLCDTLRAQVDEVRQVERQILHIVVDKCGMP
RSEFIARFPGSETDLDWAEKIAAEGHSYGAILSRNIPAIREQQQRLLDLQARVVLPLKDL
KETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGLEP
DPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAPADAALHA
SMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPSRSDKLKSFLEGN
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtccgaggcgaaggcggcgaagccggcttcgccgcgggcgagtgcgaaaagcgca
aggggagcggctgccgcgccggacgaaacggcagctactcgagcatccacggttcaaccg
gctgtagtccagcagccgcgagtcgatttagccggtacggcgaactccatgacgaaaaag
ctgaacgaagtatccgtcgatgacgacgcaaaccagagcgacgaccagcctaccgctgcg
tcgggcaaaggcgaaaaggccaaggcgcgcgaccgtcgcgccaaggaaaaggcgctgctg
aaggaagcgttcgcgacgagcacgcccggcacggccgaggagctcgaagagcgccgtacg
aagctgcgcgcgctgatcaagctcggcaaggagcgcggcttcctcacgtacgccgaaatc
aacgaccatctgccggacaacttcacggaaacggaagcgctcgaaggcatcatcggcacg
ttcaacgacatgggcgtcgcggtgtacgagcaggcgcccgacgccgagacgctgctgttg
aacgacaatgcgcccgccgcgtcgtccgacgatgaagtcgaggaggaagcggaagtcgcg
ctgtcgaccgtcgattccgaattcggccgcacgaccgatccggtgcggatgtacatgcgc
gagatgggcacggtcgagctgctcacgcgcgaaggcgaaatcgagatcgcgaagcggatc
gaggacggcctgcgccacatggtgatggcgatttccgcgtgcccgacgacgatcgccgac
atcctcgcgatggccgagcgcgtggcgaatgaggagagccgcgtcgacgagctcgtcgac
ggcctgatcgatccgaatgccgccgataccgacggcttctcggagaaggacgccgaggaa
atcgagaacgaggacgcggaagccgaagaggacgacgaagaggaagaagaggacgacgac
ggcgccgcgcaggcgaccgccaacgcggcccagctcgaagcgctcaagcgcgcgtcgctc
gagaagttcgcgctcatcagcgaatggttcgacaagatgcgccgcgcgttcgagaaggaa
ggctacaagtcgaagtcgtacctgaaggcgcaggaaacgatccagaacgagctgatgtcg
atccgcttcaccgcgcgcaccgtcgaacgcctgtgcgatacgctgcgcgcgcaggtcgac
gaagtgcgccaggtcgagcgtcagatcctgcacatcgtcgtcgacaagtgcgggatgccg
cgctcggagttcatcgcgcgcttcccgggcagcgagaccgatctcgactgggccgagaag
atcgcggccgaaggccattcgtatggggcgatcctgtcgcgcaacattccggcgatccgc
gaacagcagcagcgcctgctcgacctgcaggcgcgcgtcgtgctgccgctcaaggacctg
aaggaaaccaaccgccagatggcggcgggcgaactgaaggcgcgccaggcgaagcgcgag
atgaccgaggcgaacctgcgcctcgtgatctcgatcgcgaagaagtacacgaaccgcggc
ctgcagttcctggacctgattcaggagggcaacatcggcctgatgaaggcggtggacaag
ttcgaataccgtcgcggctacaagttctcgacgtatgcgacgtggtggattcgccaggcc
attacgcgctcgatcgcggaccaggcgcgcacgatccggattccggttcacatgatcgag
acgatcaacaagatgaaccgcatctcgcggcagatcctgcaggaaaccggcctcgagccg
gatccggcgacgctcgccgagaagatggagatgccggaggacaagatccgcaagatcatg
aagatcgcgaaggagccgatctcgatggaaacgccgatcggcgacgacgacgattcccat
ctcggcgacttcatcgaggacaccaacacggtcgcgccggcggatgccgcgctgcatgcg
agcatgcgcgacgtcgtgaaggacgtgctcgattcgctgacgccgcgcgaggcgaaggtg
ctgcggatgcgcttcggcatcgagatgagcaccgatcacacgctcgaggaagtcggcaag
cagttcgacgtcacgcgcgagcggattcgtcagatcgaggcgaaggcgctgcgcaagctg
cgtcatccgagccgttcggacaagctgaagtcgttcctcgaggggaactga
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