Bordetella pseudohinzii: BBN53_00510
Help
Entry
BBN53_00510 CDS
T04945
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bpdz
Bordetella pseudohinzii
Pathway
bpdz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBN53_00510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpdz03019
]
BBN53_00510
Enzymes [BR:
bpdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBN53_00510
Messenger RNA biogenesis [BR:
bpdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBN53_00510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
P-loop_SecA
HI1480
Motif
Other DBs
NCBI-ProteinID:
ANY18120
LinkDB
All DBs
Position
complement(119209..120660)
Genome browser
AA seq
483 aa
AA seq
DB search
MTTSSSFADLGLADSLLRAIAETGYTAPTPIQAQAIPQVLRGGDLLAAAQTGTGKTAGFT
LPILQLLSQRKPAKRIPGRPRCLILTPTRELTAQVAESVQVYGKHTGLTSMVMFGGVNIN
PQITALRKPVDILVATPGRLLDHAGQKTVDLSGVEILVLDEADRMLDMGFIRDIRKVLAL
LPKSRQNLLFSATFSDEIRELARGVLNNPGEVSVTPRNTATELVTQTVHIVEQAHKRDLV
SHLIRESGWHQVLVFTRTKHGANRLAEKLVKDGLSAAAIHGNKSQSARTRALAGFKDGSV
AVLVATDIAARGLDIDQLPQVVNFELPNVPEDYVHRIGRTGRAGATGAAVSLVDSSEIKL
LKAIERLIKKTIERKTVDGWTPPVGVAAEPEPQDDEERGFGRRNGRGAPGGRNGGNRGGG
RAPRPAAETRAPRPARSAEGRPAPAKPAAPKPAAPRPEAGAARRPESGNRPARGPARGVL
LGK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttgactacctcttcttcttttgccgacctcgggctggctgattccctgttgcgtgcgatc
gccgagaccggctataccgcgcccacgcccatccaggcccaggccattccgcaggtgctg
cgcggcggcgacctgctggccgccgcccagaccggcaccggcaagaccgccggcttcacc
ctgcccatcctgcaactgctgtcgcagcgcaaacccgccaaacgcatccctggccggccg
cgctgcctcatcctgacccccacccgcgagctcaccgcccaggtggccgagtccgtccaa
gtctacggaaaacacaccggccttacctcgatggtgatgttcggcggcgtgaatatcaac
ccgcagatcacggccctgcgcaagcccgtggacatcctggtggccacgcccggccgcctg
ctggatcacgccggccagaaaaccgtcgacctctcgggcgtcgaaatcctggtgctcgat
gaagccgaccgcatgctggacatgggtttcatccgcgatatccgcaaggtgctggccctg
ctgcccaagtcgcgccagaacctgctgttctcggccaccttctccgacgagatccgcgag
ctggcccgcggcgtgctgaacaatccgggcgaggtctccgtgaccccgcgcaacaccgcc
accgagctggtcacccagaccgtgcacatcgtcgagcaggcccataagcgcgacctggtc
agccatctgattcgcgaaagcggctggcaccaggtgctggtcttcacccgcaccaagcac
ggcgccaaccgcctggccgaaaaactcgtcaaggacggcctgtcggccgccgccatccac
ggcaacaagagccaatcggcgcgcacgcgggcgctggccggcttcaaggacggcagcgtg
gccgtcctggtggccaccgacatcgccgcgcgcggcctggacatcgatcaattgccccag
gtggtcaatttcgagctgcccaatgtgcccgaagactatgtgcaccgcatcggccgcact
ggccgcgccggcgccacgggcgcggccgtctcgctggtcgacagcagcgaaatcaagctg
ctcaaggccatcgagcgcctgatcaagaaaaccatcgaacgcaagacggtcgacggctgg
acgccccccgtgggcgtggcggccgagcccgaaccgcaagacgacgaagaacgcggcttt
ggccgccgcaacggccgaggcgcgcccggtggccgcaacggcggcaaccgcggcggcggc
cgtgcccctcgtccggctgccgaaacgcgcgcgccgcgtccggcccgcagcgccgaaggc
cgcccggccccggccaaaccggccgcgcccaagccggccgcgccgaggccggaagccggc
gccgcccgccgccccgaaagcggcaatcgcccggctcgcggccccgctcgcggggtgctg
ctcggcaagtaa
DBGET
integrated database retrieval system
