Bordetella pseudohinzii: BBN53_01240
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Entry
BBN53_01240 CDS
T04945
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bpdz
Bordetella pseudohinzii
Pathway
bpdz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BBN53_01240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpdz03021
]
BBN53_01240
Transcription machinery [BR:
bpdz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBN53_01240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_24
HTH_11
HTH_36
Sigma70_ECF
HTH_Tnp_ISL3
HTH_28
HTH_40
HTH_29
GerE
Motif
Other DBs
NCBI-ProteinID:
ANY14631
UniProt:
A0ABM6DAP5
LinkDB
All DBs
Position
complement(265460..265978)
Genome browser
AA seq
172 aa
AA seq
DB search
MGANVFSASQDDVHRLYTDHHGWLNGWLRKKLGNSFDAADLAQDTFVRVLRHRRELPAVR
EPRAYLVTIAGRLLLNHYRRRSLERAYEEALAALPPERAPAPEQRLLILETLDHVDALLA
ALPAKTRTAFLLAQVDRLPQAAIAERLQLSVRTVQRHILRAYEQCILAMGEA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgccaacgtgttttctgcctcccaagacgatgtccaccgactctataccgatcat
catggctggctgaacggttggctgcgcaagaagctgggcaatagcttcgatgcggcggac
ctggcccaggacacattcgtgcgcgtgctgcggcaccgccgcgagctgcccgccgtgcgc
gagccgcgcgcctatctggtcaccatcgccggccgcctgctgctcaatcactaccgccga
cgctcgctggagcgggcctatgaagaagccctggccgcgctgccgcccgagcgcgcgccc
gcgcccgagcagcgcctgctgatcctcgagacgctggaccacgtcgacgccttgctggcc
gccctgccggccaagacgcgcaccgccttcctgctggcccaggtcgatcgcctgccccag
gccgccatcgccgagcgcctgcagctgtcggtgcgcacggtgcagcgccacatcctgcgc
gcctacgagcaatgcatcctggcgatgggcgaggcatga
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