Bordetella pseudohinzii: BBN53_01485
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Entry
BBN53_01485 CDS
T04945
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bpdz
Bordetella pseudohinzii
Pathway
bpdz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBN53_01485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpdz03400
]
BBN53_01485
Enzymes [BR:
bpdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBN53_01485
DNA repair and recombination proteins [BR:
bpdz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BBN53_01485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
AAA_30
Zn_ribbon_PriA
Zn_ribbon_6
nSTAND_NTPase5
AAA_22
AAA_16
AAA_19
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
ANY18136
UniProt:
A0A0J6C6Y3
LinkDB
All DBs
Position
315118..317187
Genome browser
AA seq
689 aa
AA seq
DB search
MLEPAAVWVRVALDVPLHGPFDYRLPPGMAASAVVPGSRVIVPFGRRKLVGVVLALPAEP
AVDPAQVRDVEQLLEDLPPFPEDWMRLAQFAADYYQRPLGEVMLPVLPPPLRKPSAYQGK
RSGAGPVARLDARKPRHAAPAPVSPDTAPALNEEQAAAVAAIAGISGFKTVLLHGVTGSG
KTEVYLHAAQAALAAGRQVLLLVPEINLTPQLEAALRARLEHLVGQDGVAVLHSGLSDGE
RLQAWARVQRGQARMLLGTRMAIFAPMPDLGLIVVDEEHDASYKQQEGLRYSARDLAVWR
GHERGIPVVLGSATPSLESWHHAQRGHYLRLALANRARAAELPRMRLVDTRRLPLKHGLS
PQLIDAITERLGRGEQALVFLNRRGYAPVLHCASCGWVTHCPRCSAFTVLHRAGASGGYR
LHCHHCGYQGPVPRACPDCGDQDLQPMGRGTQRIEEHLAEMFPQARIARIDADSTRRKGS
AQALFAAVHAGEVDILVGTQMVAKGHDFSRLGLVGVLNADAMLFAQDFRAPERLFAQLMQ
VAGRAGRHVGGGEVLIQTGYPEQPVYQALVRHDYAGFARHSLEEREVTGLPPFAYQALLT
SEAREVAQALDFLQAARQAGAALSEAITLYDPVPLRIVRVANVERAQLLVESASRPALQA
FLPHWMDAIAPLAAQARVRWQLEVDPLEI
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagccggccgccgtgtgggtccgggtggcgctggacgtgcccctgcatgggcct
ttcgactatcggctgccgcccggcatggccgcttcggccgtggtgcccggcagccgggtg
atcgtgccgtttggcaggcgcaagctggtgggcgtggtgctggcgctgccggccgagccg
gccgtggaccctgcccaggtgcgggatgtcgagcagttgctggaagatctgccgcctttc
cccgaagattggatgcgtctggcgcaatttgccgccgattactaccagcggccgctgggc
gaggtgatgctgcccgtgttgccgccgccgctgcgcaagcccagcgcctaccagggcaag
cgctcgggcgccgggccggtggcgcgcctggacgcgcgcaagccgcgccacgccgcgccg
gctccggtctcgcccgataccgcgcccgccctcaatgaagagcaagcggccgccgtggcg
gcgatcgccggcatttcgggcttcaagaccgtcctgctgcatggcgtgaccggcagcggc
aagaccgaggtatatctgcatgccgcgcaagccgccctggcggccgggcggcaggtgttg
ctgctggtgcccgaaatcaatctgacgccgcagctggaggccgcgctgcgcgcgcggctg
gagcacctggtcgggcaggacggcgtggccgtgctgcacagcggcctgtccgatggcgag
cgcctgcaggcctgggcccgggtgcagcgcggccaggcgcggatgctgctgggcacgcgc
atggccatcttcgcgcccatgcccgatctcggcctcatcgtggtcgatgaagagcatgac
gcctcctataagcaacaggaaggcctgcgctactcggcccgcgatctggcggtatggcgc
ggccatgagcgcgggattccggtggtgctgggttcggccacgccgtcgctggagagctgg
caccacgcccagcggggccactacctgcgcctggcgctggccaatcgcgcgcgggcggcc
gagctgccgcgcatgcgcctggtggacacgcggcggctgccgctcaagcatgggttgtcg
ccccagttgatagacgccatcaccgagcgcctggggcgcggcgagcaggccctggtcttc
ctgaaccggcgcggctatgcgccggtgctgcattgcgcctcctgcggttgggtgacccat
tgcccgcgctgctcggcgtttacggtgctgcatcgcgcgggcgcgtcgggcggctatcgc
ctgcattgccatcattgcggctaccaggggccggtgccgcgcgcctgtccggattgcggc
gaccaggatttgcagcccatgggtcgcggcacccagcgcatcgaagagcatctggccgag
atgtttccccaggcgcgcattgcccgcatcgatgccgacagcacgcgccgcaagggcagc
gcgcaagccctgttcgccgccgtccacgcgggcgaggtcgatatcctggtgggcacgcag
atggtggccaagggccatgatttttcgcggcttggactggtgggcgtgctcaacgcggac
gccatgctgttcgcccaggatttccgggcgccggagcgtctgttcgcccagctgatgcag
gtggccggccgcgccggccgccatgtgggcggcggcgaggtgctgatccagacaggctat
ccggagcagccggtctaccaggcgctggtccgccacgactacgccggttttgcgcgccat
tcgctcgaagaacgcgaagtgacgggtctgccgccctttgcctaccaggccctgctgacc
tccgaggcgcgcgaagtcgcccaggcgctggattttctgcaagccgccaggcaggccggc
gcggccctgagcgaggcgattacactctacgatcccgtgccgctgcgcatcgtgcgcgtt
gccaatgtggagcgcgcccaactgctggtcgagagcgccagccggccggcgctgcaggct
ttcctgccgcattggatggacgcgatcgcgcccctggccgcccaggccagggtgcgctgg
cagctggaggtcgatccgctggagatctga
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