Bordetella pseudohinzii: BBN53_03000
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Entry
BBN53_03000 CDS
T04945
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpdz
Bordetella pseudohinzii
Pathway
bpdz03030
DNA replication
bpdz03430
Mismatch repair
bpdz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBN53_03000
03430 Mismatch repair
BBN53_03000
03440 Homologous recombination
BBN53_03000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpdz03032
]
BBN53_03000
03400 DNA repair and recombination proteins [BR:
bpdz03400
]
BBN53_03000
Enzymes [BR:
bpdz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBN53_03000
DNA replication proteins [BR:
bpdz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBN53_03000
DNA repair and recombination proteins [BR:
bpdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBN53_03000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ANY14954
UniProt:
A0A0J6C4F2
LinkDB
All DBs
Position
638879..639613
Genome browser
AA seq
244 aa
AA seq
DB search
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRAVTGRNLHIYLNPDRDSDPEALAVHGLT
TEFLSDKPRFGDVAEQFISFIEGAELIAHNAGFDVKFFNAELQKIGRKTIDSYCDSVIDS
LAHARTLYPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVD
DSQGAGGAQVELGRFDASVLPVIAAAGEDLAEHEAYLAALDKAVGGACLWRGLDASAETA
PQTV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagatcatcttcgataccgaaaccaccggcctggaccccgcccagggccatcgc
atcgtcgaaatcggctgcgtcgagatcgtcaaccgcgcggtcaccggccgcaacctgcac
atctacctgaacccggaccgcgacagcgaccccgaagcgctggccgtccacggcctgacc
accgagttcctgtcggacaagccgcgtttcggcgatgtggccgagcagttcatcagcttc
atcgagggcgccgaactcatcgcccacaacgccggcttcgacgtcaagttcttcaatgcc
gagctgcagaagatcgggcgcaagaccatagacagctattgcgacagcgtgatcgactcg
ctggcccatgcgcgcaccctctatccgggcaagcgcaattcgctcgacgccttgtgcgac
cgctatggcatctccaatgcccaccgcacgctgcacggcgccttgctggattcgcagctg
ctcgccgaggtctggctggccatgacgcgcgggcaggatgccctgctcatcgatgtcgac
gacagccagggcgccggcggcgcccaggtcgagctgggccgcttcgatgcttccgtactg
ccggtcatcgccgcggccggcgaagacctggccgagcacgaggcctatctcgccgcgctg
gacaaagccgtgggcggcgcctgcctgtggcgcggcctcgacgccagcgccgagacggcg
ccacagacggtgtga
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