Bordetella pseudohinzii: BBN53_05160
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Entry
BBN53_05160 CDS
T04945
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bpdz
Bordetella pseudohinzii
Pathway
bpdz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBN53_05160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpdz03021
]
BBN53_05160
03019 Messenger RNA biogenesis [BR:
bpdz03019
]
BBN53_05160
Transcription machinery [BR:
bpdz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BBN53_05160
Messenger RNA biogenesis [BR:
bpdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBN53_05160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
ResIII
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
ANY15330
UniProt:
A0A0J6C0H4
LinkDB
All DBs
Position
complement(1150243..1151499)
Genome browser
AA seq
418 aa
AA seq
DB search
MHLNELKALHVSQLLEMAAGLEIENANRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GVTPETIKHRIMFENLTPLHPNQVMRLERDIKSEENLTGRILDIFAPIGKGQRGLIVAPP
KSGKTVMMQHIAHAITTNYPDAVLIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTILGTALIETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRVYPAINL
NKSGTRREELLIKPELLQKVWVLRKFIHDMDEIQSMEFIVDKMRATKTNAEFFDMMKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaatgaactgaaggcgctgcacgtgtcgcagctgctggaaatggccgctggc
ctggaaatcgagaacgccaaccgcctgcgcaagcaggagttgatgttcgccatcatgaag
cggcgcgccaagcaaggcgagcagatcttcggcgacggcgtcctggaagtcctgcccgac
ggtttcggtttcctgcgctcgcccgagacctcgtatctggccagtaccgacgacatctat
atctcgccgtcccagatccgacgcttcaacctgcatacgggcgattccatcgaaggcgaa
gtccgcacgcccaaggacggcgaacgctacttcgcgctggtcaaggtcgacaaggtcaat
ggcgtcacgcccgagaccatcaagcaccggatcatgttcgagaacctgacgccgctgcac
cccaaccaggtgatgcgcctcgaacgcgatatcaagagcgaagaaaacctcaccggccgt
atcctcgatatcttcgcccccatcggcaagggccagcgcggcctgatcgtcgccccgccc
aagtcgggcaagacggtgatgatgcagcacatcgcgcatgccatcaccaccaactacccg
gatgccgtcctgatcgtcctgctggtcgatgagcgccccgaagaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtcgcctccaccttcgacgagccggccacgcgccacgtg
caggtcgccgaaatggtcatcgagaaggccaagcgcctggtcgagatgaaaaaagacgtg
gtcatcctgctggactcgatcacccgcctggcccgcgcctacaacaccgtggtgcccgcc
tcgggcaaggtgctgaccggcggcgtggacgccaacgccctgcagcgtcccaagcgcttc
ttcggcgcggcgcgcaacctcgaagaaggcggctcgctcaccatcctgggcacggcgctg
atcgaaaccggcagccgcatggatgaagtcatctatgaagaattcaagggcaccggcaac
tccgaagtgcacctggagcgccgcctggccgaaaagcgcgtctacccggcgatcaacctg
aacaagtcgggcacccgccgcgaagagctgctgatcaagcccgagctgctgcagaaggtc
tgggtgctgcgcaagttcatccacgacatggacgaaatccaatccatggaattcatcgtg
gacaagatgcgcgccaccaagaccaatgccgaattcttcgacatgatgaagaagtaa
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