Bordetella pseudohinzii: BBN53_06650
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Entry
BBN53_06650 CDS
T04945
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
bpdz
Bordetella pseudohinzii
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpdz03032
]
BBN53_06650
03036 Chromosome and associated proteins [BR:
bpdz03036
]
BBN53_06650
03400 DNA repair and recombination proteins [BR:
bpdz03400
]
BBN53_06650
DNA replication proteins [BR:
bpdz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BBN53_06650
Chromosome and associated proteins [BR:
bpdz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BBN53_06650
DNA repair and recombination proteins [BR:
bpdz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BBN53_06650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ANY15609
UniProt:
A0A0J6C8N5
LinkDB
All DBs
Position
1476487..1476846
Genome browser
AA seq
119 aa
AA seq
DB search
MTKSELIAALAARYPQLAARDTDYAVKTMLDAMTQALSSGQRIEIRGFGSFSLSQRSPRV
GRNPKSGEQVLVPGKQVPHFKAGKELRERVDLAGNEPGGDSSHESSDPLQSVMDMHAMH
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagtcggagctgatcgccgctctggcggcccgctatccccagctggccgcccgc
gacaccgattacgcggtcaagaccatgcttgacgccatgacccaggccctgtcctcgggt
cagcgcatcgaaatccgtggttttggcagcttttccttgtcgcagcggtctccgcgcgtg
gggcgcaaccccaagtccggcgaacaagtgctggtgcctggcaaacaggtgccgcacttc
aaggcgggcaaggagttgcgagagcgcgtggatctggctggcaacgaaccgggtggcgat
tcctcccatgaatcgtccgaccccctgcagtccgtgatggacatgcatgccatgcactga
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integrated database retrieval system
