Bordetella pseudohinzii: BBN53_06795
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Entry
BBN53_06795 CDS
T04945
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bpdz
Bordetella pseudohinzii
Pathway
bpdz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BBN53_06795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpdz03019
]
BBN53_06795
03009 Ribosome biogenesis [BR:
bpdz03009
]
BBN53_06795
Messenger RNA biogenesis [BR:
bpdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BBN53_06795
Ribosome biogenesis [BR:
bpdz03009
]
Eukaryotic type
Pre-60S particles
RNases
BBN53_06795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
MOR2-PAG1_C
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
ANY15634
UniProt:
A0A0J6C7F3
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All DBs
Position
1504987..1505532
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AA seq
181 aa
AA seq
DB search
MAANENRLVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVVHQDDSVLDAMDN
WNKSTHGKSGLIDKVRASTLTEAQAEQQLIDFLAQHVPAGKSPLCGNTISQDRRFMFAYM
PNLERFFHYRNLDVSTLKELARRWAPAVYKGFEKKSRHEALADIYESIDELKYYREHFLK
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaacgaaaatcgcctggtctggctcgacatggaaatgacggggctggatcct
gagaaagaacgcatcatcgaagtcgccgtcgtggtgaccgagccggatctgacggtcgtg
gccgaagggcccgtcctggtcgtgcaccaggatgacagcgtgctggacgccatggacaac
tggaacaaatccacccatggcaaaagcggcctgatcgacaaggtgcgcgcctcgacgctg
accgaagcccaggccgagcagcagctcatcgatttcctggcccagcatgtgccggccggc
aagtcgccgctgtgcggcaataccatcagccaggaccgccgcttcatgttcgcctatatg
ccgaacctggagcgttttttccattaccgcaacctggatgtcagcaccctgaaggaattg
gcgcggcgctgggcgcccgccgtctacaagggcttcgagaagaagagccgccacgaggcg
ctggccgacatctacgagtccatcgacgaactcaagtactaccgcgagcacttcctgaag
gtctag
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