Bordetella pseudohinzii: BBN53_09305
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Entry
BBN53_09305 CDS
T04945
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bpdz
Bordetella pseudohinzii
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpdz03400
]
BBN53_09305
Enzymes [BR:
bpdz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BBN53_09305
DNA repair and recombination proteins [BR:
bpdz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BBN53_09305
Prokaryotic type
BBN53_09305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ANY16078
UniProt:
A0A0J6EVQ3
LinkDB
All DBs
Position
complement(2023710..2025116)
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AA seq
468 aa
AA seq
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MQTLVWLRSDLRLHDNPALAAAAAQGPVRAVFLAAPGQWRAHGDAPVKVDFWRRNVLALG
RSLGELGIELHVLPVRDWSRAPQALAGFCASHGIGAVHVNVEWAINEQRRDQACEARLRE
AGIAFVRHHGGTLLPPGSVRTGKGDPYRVFTPYARACREILRAAPPAAVRAPKAQAPARE
MAPLPASWPEAAPTLAALWPAGEAHAHERLRAFLDEGLARYHERRDLPALPGTSALSPYL
ACGVLSPAQCLRAALRANRGEIDSGQAGARAWITELLWREFYQHLLAAYPGLSMHRPMRP
ETAHLAWRDAPQDLAAWQSGRTGIPIVDAAQRQLLATGWMHNRLRMVSAMFLSKNLLIDW
RLGEAWFMNHLVDGELAANNGGWQWSASTGADAVPYFRVFNPITQSRRFDPDAAFLRRWL
PELAGLDDKAIHEPSAGERRAAGYPDAIVDLKASRLRAIEAYARLSPS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccctggtctggctgcgcagcgatctgcgcctgcacgacaacccggcgctggcc
gccgcggcagcccaagggccggtccgcgcggtgttcctcgccgcgcccggccaatggcgg
gcgcatggcgacgcgcccgtcaaagtggatttctggcgccgcaatgtgctggcgctgggc
cgctcgctgggagaactaggcatcgaattgcatgtgctgccggtgcgcgattggtcgcgg
gcgccgcaagccctggccggtttctgcgcctcgcatggcatcggcgcggttcacgtcaat
gtcgaatgggccatcaatgaacagcgccgcgaccaggcctgcgaggcccgtctgcgcgag
gccggcatcgcctttgtccgccaccacggcggcaccctgttgccgccgggcagcgtgcgc
accggcaagggcgacccctaccgcgtgttcaccccttatgcgcgcgcctgccgcgagatc
ctgcgcgccgcgccgccggcggcggtgcgcgcgcccaaggcccaggccccggcccgcgag
atggcgcccctgccggcgagctggcccgaagccgcccccaccctggccgcgctgtggccg
gccggcgaagcccatgcccatgagcgcctgcgggccttcctggacgaaggcctggcgcgc
taccacgagcgccgcgacctgccggccctgccaggcaccagcgccctatcgccctatctg
gcctgcggcgtgctgtcgccggcccaatgcctgcgcgccgcgctgcgagccaaccggggc
gagatcgacagcggccaggccggcgcgcgcgcctggatcaccgaattgctgtggcgcgag
ttctaccagcatctgctggcggcctaccccggcctgtccatgcaccggcccatgcggccg
gagacggcgcatctggcctggcgcgatgcgccgcaagacctggcggcctggcaatccggc
cgcaccggcattcccatcgtcgatgccgcgcagcgccaattgctggccaccggctggatg
cacaaccggctgcgcatggtgagcgccatgtttctgtccaaaaacctcttgatcgactgg
cgcctgggcgaggcctggttcatgaaccatctggtggacggcgagctcgcggccaacaac
ggcggctggcaatggagcgcctccacgggcgcggacgccgtgccctacttccgggtgttc
aatcccatcactcagtcgcgccgcttcgatccggacgcggccttcctgcgccgctggctg
cccgaactggccgggctggacgataaggccatccacgaaccctcggcgggcgaacgccgc
gcggccggctatcccgacgccatcgtcgatctgaaggccagccggctgcgcgccatcgag
gcctacgcgcgcctgtcgccgtcctga
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